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| 1 | Defined tumor antigen-specific T cells potentiate personalized TCR-T cell therapy and prediction of immunotherapy response显示文摘Personalized immunotherapy targeting tumor-specific antigens(TSAs)could generate efficient and safe antitumor immune response without damaging normal tissues.Although neoantigen vaccines have shown therapeutic effect in clinic trials,precise prediction of neoantigens from tumor mutations is still challenging.The host antitumor immune response selects and activates T cells recognizing tumor antigens.Hence,T cells engineered with T-cell receptors(TCRs)from these naturally occurring tumor antigen-specific T(Tas)cells in a patient will target personal TSAs in his/her tumor.To establish such a personalized TCR-T cell therapy,we comprehensively characterized T cells in tumor and its adjacent tissues by single-cell mRNA sequencing(scRNA-seq),TCR sequencing(TCR-seq)and in vitro neoantigen stimulation.Compared to bystander T cells circulating among tissues,Tas cells were characterized by tumor enrichment,tumor-specific clonal expansion and neoantigen specificity.We found that CXCL13 is a unique marker for both CD4^(+)and CD8^(+)Tas cells.Importantly,TCR-T cells expressing TCRs from Tas cells showed significant therapeutic effects on autologous patient-derived xenograft(PDX)tumors.Intratumoral Tas cell levels measured by CXCL13 expression precisely predicted the response to immune checkpoint blockade,indicating a critical role of Tas cells in the antitumor immunity.We further identified CD200 and ENTPD1 as surface markers for CD4^(^(+))and CD8^(^(+))Tas cells respectively,which enabled the isolation of Tas cells from tumor by Fluorescence Activating Cell Sorter(FACS)sorting.Overall,our results suggest that TCR-T cells engineered with Tas TCRs are a promising agent for personalized immunotherapy,and intratumoral Tas cell levels determine the response to immunotherapy. | Jingjing He Xinxin Xiong Han Yang Dandan Li Xuefei Liu Shuo Li Shuangye Liao Siyu Chen Xizhi Wen Kuai Yu Lingyi Fu Xingjun Dong Kaiyu Zhu Xiaojun Xia Tiebang Kang Chaochao Bian Xiang Li Haiping Liu Peirong Ding Xiaoshi Zhang Zhenjiang Liu Wende Li Zhixiang Zuo Penghui Zhou | 2022 | Cell Research2022，32，6： | 10 |
| 2 | Multifunctional regulatory protein connective tissue growth factor (CTGF):A potential therapeutic target for diverse diseases显示文摘Connective tissue growth factor(CTGF),a multifunctional protein of the CCN family,regulates cell proliferation,differentiation,adhesion,and a variety of other biological processes.It is involved in the disease-related pathways such as the Hippo pathway,p53 and nuclear factor kappa-B(NF-κB)pathways and thus contributes to the developments of inflammation,fibrosis,cancer and other diseases as a downstream effector.Therefore,CTGF might be a potential therapeutic target for treating various diseases.In recent years,the research on the potential of CTGF in the treatment of diseases has also been paid more attention.Several drugs targeting CTGF(monoclonal antibodies FG3149 and FG3019)are being assessed by clinical or preclinical trials and have shown promising outcomes.In this review,the cellular events regulated by CTGF,and the relationships between CTGF and pathogenesis of diseases are systematically summarized.In addition,we highlight the current researches,focusing on the preclinical and clinical trials concerned with CTGF as the therapeutic target. | Minyang Fu Dandan Peng Tianxia Lan Yuquan Wei Xiawei Wei | 2022 | Acta Pharmaceutica Sinica B2022，12，4： | 5 |
| 3 | Author correction to‘Multifunctional regulatory protein connective tissue growth factor(CTGF):A potential therapeutic target for diverse diseases’[Acta pharmaceutica sinica B 12(2022)1740-1760]显示文摘The authors regret that there was an error in 7.Conclusion and prospect section of the article.The last paragraph of this section‘Under particular external…integrins interact with CT domain’is supposed to be the content of the figure legend(Fig.1).It is superfluous in this part and should be deleted.The revision does not affect any conclusions of this work. | Minyang Fu Dandan Peng Tianxia Lan Yuquan Wei Xiawei Wei | 2022 | Acta Pharmaceutica Sinica B2022，12，12： | 3 |
| 4 | Characterization of viromes within mosquito species in China显示文摘Mosquitoes are vectors of multiple disease-causing agents that cause worldwide outbreaks of serious infectious diseases in both humans and animals. These arboviral agents include Dengue virus (DENV), Zika virus (ZIKV), chikungunya virus, yellow fever virus, Japanese encephalitis virus (JEV),and Rift Valley fever virus. Thus, mosquitoes are key to the study of viral origin, spread, and the epidemic tendency of these infectious diseases (Hall and Macdonald, 2016). | Jiang Du Fan Li Yelin Han Shihong Fu Bo Liu Nan Shao Haoxiang Su Weijia Zhang Dandan Zheng Wenwen Lei Jie Dong Lilian Sun Ying He Jianmin Wang Fan Yang Huanyu Wang Guodong Liang Zhiqiang Wu Qi Jin | 2020 | Science China(Life Sciences)2020，63，7： | 2 |
| 5 | Simulation of Evapotranspiration Based on BEPS-TerrainLab V2.0 from 1990 to 2018 in the Dajiuhu Basin显示文摘Accurate estimations of evapotranspiration(ET)are essential for understanding land-atmosphere coupling and atmosphere-underlying surface energy and water vapor exchanges.Based on input data processing,this paper simulates the temporal and spatial variation of ET in the Dajiuhu Basin from 1990 to 2018 using the BEPS-Terrain Lab V2.0 model.Compared with the ET measured by an eddy covariance(EC)tower,the model explained 80.1%of the ET variation.From 1990 to 2018,the average annual ET in the Dajiuhu Basin was 1262.7 mm/yr indicating a downward trend(–27.12 mm/yr).In 2005,a sudden change point was observed based on the Mann-Kendall(MK)test and 3-year moving t-test.Around 2005,the downward trend in ET slowed and the proportional trend of ET to precipitation changed from upward trend to downward trend.Regarding spatial distribution,the ET in the basin’s central part was smaller than that in the basin’s surrounding area,the ET of the southern slope was higher than that of the northern slope,and the decrease in the ET rate on the sunny side was lower than that on the shady side.ET decreased as the elevation increased,with the fastest decrease observed between 2184 and 2384 m.For different landcover types,the average ET exhibited the following order:deciduous forest>mixed forest>wetland>grass>agriculture land.Decreased solar radiation is the main reason for the decreased ET in the Dajiuhu Basin,followed by increased wind speed and relative humidity,which together contribute 83.9%to the ET trend.This paper provides a theoretical basis for the study of ET changes and the mechanism of ET and provides a decision-making reference for water resource management in the Dajiuhu Basin and even the South-to-North Water Transfer Project. | WU Zongfan ZHANG Lihua LIU Dandan ZHANG Kang ZHU Zhiru FU Yasheng MA Yongming | 2020 | Chinese Geographical Science2020，30，6： | 2 |
| 6 | Differential expression of bone morphogenetic protein 5 in human lung squamous cell carcinoma and adenocarcinoma显示文摘骨头形态基因的蛋白质(BMP ) 在肿瘤房间增长,转移,和侵略起重要作用。然而,在有 non-small-cell 肺癌症(NSCLC ) 和他们与 NSCLC 致病的关联的病人的 BMP 的表示模式还没被检验。在这研究,在 NSCLC 纸巾的 BMP 家庭成员的 mRNA 层次被分析,结果证明分别地, BMP5 和 BMP7 的 mRNA 层次与在相应 noncancerous 纸巾的那些相比在肿瘤纸巾显著地下面调整、起来调整。有趣地, BMP5 的 mRNA 水平在肺比那在肺腺癌纸巾是显著地更高的有鳞的房间癌纸巾。而且,从 immunohistochemistry 分析的结果比在肺在肺腺癌证实了 BMP5 蛋白质的更强壮的表示有鳞的房间癌。我们的调查结果建议 BMP5 可能为有 NSCLC 的病人是潜在的预示的 biomarker 或治疗学的目标。 | Taoran Deng Dandan Lin Man Zhang Qingchuan Zhao Weina Li Bo Zhong Yu Deng Xiangning Fu | 2015 | Acta Biochimica et Biophysica Sinica2015，47，7： | 2 |
| 7 | Frequent RNF43 mutation contributes to moderate activation of Wnt signaling in colorectal signet-ring cell carcinoma显示文摘Dear Editor,Signet-ring cell carcinoma(SRCC)is a rare subtype of colorectal cancer(CRC)characterized histologically by the accumulation of mucins in the cytoplasm and displacement of nuclei to the cellular periphery,accounting for about 1%CRC(Fig.S1A)(Borger et al.,2007).Compare to common subtypes of CRC,such as adenocarcinoma(AC)and mucinous adenocarcinoma(MAC),SRCC is associated with aggressive behaviors and younger age at presentation(Kang et al.,2005;Sung et al.,2008;Nitsche et al.,2013;Hugen et al.,2014;Inamura et al.,2015).A retrospective analysis of CRC patient's data at Fudan University Shanghai Cancer Center(FUSCC)also indicated a worse overall and disease-free survival of SRCC patients(Fig.S1B and S1C,Table S1). | Yaqi Li Jian Li Renjie Wang Long Zhang Guoxiang Fu Xueying Wang Yebin Wang Chuantao Fang Dandan Zhang Duo Du Xiaoji Ma Mengxue Pan Qiang Guo Xiaoya Xu Xiang Hu Yi Zhou Shaobo Mo Huijun Wang Jianjun Gao Shenglin Huang Yun Liu Sanjun Cai Guoqiang Hua Junjie Peng Fa-Xing Yu | 2020 | Protein & Cell2020，11，4： | 2 |
| 8 | Effect of surface species on Cu-TiO 2 photocatalytic activity显示文摘 | Baifu Xin Peng Wang Dandan Ding Jia Liu Zhiyu Ren Honggang Fu | 2008 | Applied Surface Science2008，，9： | 1 |
| 9 | S-allylmercaptocysteine promotes MAPK inhibitor-induced apoptosis byactivating the TGF-β signaling pathway in cancer cells显示文摘 | Dandan Tong Hui Qu Xiangning Meng Yang Jiang Duanyang Liu Shengqian Ye He Chen Yan Jin Songbin Fu Jingshu Geng | 2014 | Oncology Reports2014，，3： | 1 |
| 10 | IncR26319/miR-2834/EndophilinA axis regulates oogenesis of the silkworm,Bombyx mori显示文摘Oocyte maturation is critical for insect reproduction.Vitellogenesis,the timely production and uptake of vitellogenin(Vg),is crucial for female fecundity.Vg is synthesized in fat body and absorbed by the oocytes through endocytosis during insect oogenesis.In the silkworm,Bombyx mori,we discovered that a nucleus-enriched long-noncoding RNA(lncRNA)lncR26319 regulates Endophilin A(EndoA)-a member of the endophilin family of endocytic proteins-through competitive binding to miR-2834.The lncR26319-miR-2834-EndoA axis was required for Vg endocytosis in the silkworm;loss of EndoA or overexpression ofmiR-2834significantlyreduced eggnumbers invirginmoths.Inaddition,accumulation of miR-2834 resulted in pupal and adult deformation and reduced fecundity in females.The expression of Vg,30-kDa(30K)protein,and egg-specific protein(Esp)decreased after knockdown of EndoA or overexpression of miR-2834,while knockdown of miR-2834 had an opposite effect on the expression of Vg,30K protein gene,and Esp.These results suggest that the lncR26319-miR-2834-EndoA axis contributes to the endocytic activity in theVguptake and leads to the normal progression of oogenesis in the silkworm.Thus,miR-2834 and EndoA are crucial for female reproduction and could be potential targets for new pest management strategies in lepidopterans. | Yi Wang Yu Fu Hao Chena Chenyue Zhao Qunxia Huang Meiling Chang Wujie Qiu Yawen Shen Dandan Li | 2023 | Insect Science2023，30，1： | 1 |
| 11 | Layered CuNi-Cu_(2)O/NiAlO_(x) nanocatalyst for rapid conversion of p-nitrophenol to p-aminophenol显示文摘In order to well arrange active sites and avoid byproducts, the reasonable structured carrier nanocatalyst plays a crucial role in high catalytic performance, but still remains a challenge. Herein, the layered CuNi-Cu_(2)O/NiAlO_(x) nanosheets have been constructed through hydrothermal synthesis followed by calcination and H_(2) reduction treatment process. The in-situ formed CuNi nanoalloys (NAs) and nano-Cu_(2)O were evenly distributed on the bilateral surface of layered NiAlOx nanosheets. Based on the planar structure of nanosheet, the synergy between catalytic active CuNi NAs and photocatalytic active nano-Cu_(2)O endows CuNi-Cu_(2)O/NiAlO_(x) nanosheets with rapid conversion efficiency for catalyzing p-nitrophenol (p-NP, 14 mg·L^(−1)) to p-aminophenol (p-AP) in 32 s with the reaction rate constant k up to 0.1779 s−1, and no obvious performance decay can be observed even over 27 cycles. Moreover, high concentration of p-NP at 10 and 20 g·L^(−1) could be reduced to p-AP within 14 and 20 min, respectively. Such designed nanoalloy/bimetal-oxide heterostructure can provide a solution for rapid conversion of aminoaromatics from nitroaromatics wastewater even at a large concentration range. | Lin Fu Wei Zhou Ming Wen Qingsheng Wu Weiying Li Dandan Wu Quanjing Zhu Jiaqi Ran Panpan Ren | 2021 | Nano Research2021，14，12： | 1 |
| 12 | Silver nanoparticles-decorated polyphosphazene nanotubes : Synthesis and applications显示文摘 | Wang Minghuan Fu Jianwei Huang Dandan | 2013 | Nanoscale2013，5，17： | 1 |
| 13 | Multicomponent seismic exploration in Yinggehai Basin显示文摘 | He Hanyi Zhou Hongzhang Fu Dandan | 2002 | The Leading Edge2002，21，9： | 1 |
| 14 | An effective inducer of dopaminergic neuron-like differentiation显示文摘Rat bone marrow-derived mesenchymal stem cells were cultured and passaged in vitro. After induction with basic fibroblast growth factor for 24 hours, passage 3 bone marrow-derived mesenchymal stem cells were additionally induced into dopaminergic neurons using three different combinations with basic fibroblast growth factor as follows: 20% Xiangdan injection; all-trans retinoic acid + glial-derived neurotrophic factor; or sonic hedgehog + fibroblast growth factor 8. Results suggest that the bone marrow-derived mesenchymal stem cells showed typical neuronal morphological characteristics after induction. In particular, after treatment with sonic hedgehog + fibroblast growth factor 8, the expressions of nestin, neuron-specific enolase, microtubule- associated protein 2, tyrosine hydroxylase and vesicular monoamine transporter-2 in cells were significantly increased. Moreover, the levels of catecholamines in the culture supernatant were significantly increased. These findings indicate that Xiangdan injection, all-trans retinoic acid + glial-derived neurotrophic factor, and sonic hedgehog + fibroblast growth factor 8 can all induce dopaminergic neuronal differentiation from bone marrow-derived mesenchymal stem cells. In particular, the efficiency of sonic hedgehog + fibroblast growth factor 8 was highest. | Wenyu Fu Cui Lv Wenxin Zhuang Dandan Chen E Lv Fengjie Li Xiaocui Wang | 2013 | Neural Regeneration Research2013，8，5： | 1 |
| 15 | Precision Methylome and In Vivo Methylation Kinetics Characterization of Klebsiella pneumoniae显示文摘Klebsiella pneumoniae(K.pneumoniae)is an important pathogen that can cause severe hospital-and community-acquired infections.To systematically investigate its methylation features,we determined the whole-genome sequences of 14 K.pneumoniae strains covering varying serotypes,multilocus sequence types,clonal groups,viscosity/virulence,and drug resistance.Their methylomes were further characterized using Pacific Biosciences single-molecule real-time and bisulfite technologies.We identified 15 methylation motifs[13 N6-methyladenine(6mA)and two 5-methylcytosine(5mC)motifs],among which eight were novel.Their corresponding DNA methyltransferases were also validated.Additionally,we analyzed the genomic distribution of GATC and CCWGG methylation motifs shared by all strains,and identified differential distribution patterns of some hemi-/un-methylated GATC motifs,which tend to be located within intergenic regions(IGRs).Specifically,we characterized the in vivo methylation kinetics at single-base resolution on a genome-wide scale by simulating the dynamic processes of replication-mediated passive demethylation and MTase-catalyzed re-methylation.The slow methylation of the GATC motifs in the replication origin(oriC)regions and IGRs implicates the epigenetic regulation of replication initiation and transcription.Our findings illustrate the first comprehensive dynamic methylome map of K.pneumoniae at single-base resolution,and provide a useful reference to better understand epigenetic regulation in this and other bacterial species. | Jing Fu Ju Zhang Li Yang Nan Ding Liya Yue Xiangli Zhang Dandan Lu Xinmiao Jia Cuidan Li Chongye Guo Zhe Yin Xiaoyuan Jiang Yongliang Zhao Fei Chen Dongsheng Zhou | 2022 | Genomics, Proteomics & Bioinformatics2022，20，2： | 1 |
| 16 | Operando reconstruction-induced CO_(2)reduction activity and selectivity for cobalt-based photocatalysis显示文摘The oxygen atom coordination inducing the structure reconstruction of the catalytic site is identified and recognized ambiguously,which is related to accurately declare the mechanism in a dynamic catalytic process.Herein,we demonstrated that the reconstructed catalytic sites would lead to a remarkable performance for photocatalytic CO_(2)reduction.At the initial 4-cycles testing,the in-situ formation of CoOx active sites on the Co(CoP)surface performed an increasing transient activity and selectivity toward CO evolution.The formation of reconstructive Co-O bond and the appearance of intermediate specie CO were simultaneously observed by the pre-operando Raman,revealing the dynamic relationship between catalytic site structure and the photocatalytic properties.Moreover,density functional theory calculations showed that the electronic structure of the reconstructive surface sites could modulate the ability of CO_(2)adsorption and CO desorption.The reduced barrier energy for the rate-determining step finally improved the activity and selectivity of CO_(2)reduction. | Kun Zhao Weiying Pang Shuaiyu Jiang Canyu Hu Porun Liu Dandan Cui Xuefei An Baojuan Tian Chao Gao Pan Zhang Meng Tian Dong Fu Huijun Zhao | 2023 | Nano Research2023，16，4： | 1 |
| 17 | Comparative transcriptome analysis provides insights into the molecular mechanism of the anti-nematode role of Arachis hypogaea(Fabales:Fabaceae)against Meloidogyne incognita(Tylenchida:Heteroderidae)显示文摘Background:Plant root-knot nematode(RKN)disease is a serious threat to agricultural production across the world.Meloidogyne incognita is the most prominent pathogen to the vegetables and cash crops cultivated.Arachis hypogaea can effectively inhibit M.incognita,but the underlying defense mechanism is still unclear.Methods:In our study,the chemotaxis and infestation of the second-stage juveniles(J2s)of M.incognita to A.hypogaea root tips were observed by the Pluronic F-127 system and stained with sodium hypochlorite acid fuchsin,respectively.The transcriptome data of A.hypogaea roots with non-infected or infected by J2s were analyzed.Results:The J2s could approach and infect inside of A.hypogaea root tips,and the chemotactic migration rate and infestation rate were 20.72%and 22.50%,respectively.Differential gene expression and pathway enrichment analyses revealed ubiquinone and other terpenoid-quinone biosynthesis pathway,plant hormone signal transduction pathway,and phenylpropanoid biosynthesis pathway in A.hypogaea roots responded to the infestation of M.incognita.Furthermore,the AhHPT gene,encoding homogentisate phytyltransferase,was considered to be an ideal candidate gene due to its higher expression based on the transcriptome data and quantitative real-time PCR analysis.Conclusion:Therefore,the key gene AhHPT might be involved in the A.hypogaea against M.incognita.These findings lay a foundation for revealing the molecular mechanism of A.hypogaea resistance to M.incognita and also provide a prerequisite for further gene function verification,aiming at RKN-resistant molecular breeding. | XUEJIN YANG YUANYUAN ZHOU XINYI PENG XIAOHONG FU JIANQING MA JIANFENG LIU DANDAN CAO | 2023 | BIOCELL2023，47，9： | 0 |
| 18 | A nanoagent for concurrent therapy of breast cancer bone metastasis and cancer-induced bone pain through SLC7A11 interruption and photodynamic therapy显示文摘Bone metastasis,a life-threatening complication of advanced breast cancer,is often accompanied by debilitating pain(cancer-induced bone pain,CIBP)that severely impairs life quality and survival.The concurrent treatment of bone metastases and CIBP remains a clinical challenge because the therapeutic options are limited.In this study,we construct a near-infrared light-activated nano-therapeutic system to meet this conundrum.In detail,sorafenib(SRF)and photosensitizer(chlorin e6,Ce6)are encapsulated into mesoporous hydroxyapatite nanoparticles(HANPs),which are further functionalized with hyaluronic acid(HA)to obtain HA-SRF/Ce6@HANPs system.The designed nanoplatform destroys tumor cells in vitro and in vivo via the synergism of SRF(interrupting the exchange of cystine/glutamate by inhibiting SLC7A11)and photodynamic therapy(PDT,inducing reactive oxygen species generation).The decrease in tumor burden and reduction of extracellular glutamate significantly attenuate CIBP in mice model with developing bone cancer.Moreover,the combination of HA-SRF/Ce6@HANPs and PDT inhibit osteoclasts activation,promote osteoblast differentiation and accelerate bone repair.Overall,the nanoagent with good biocompatibility may provide an effective therapy method for the concurrent treatment of breast cancer bone metastasis and CIBP. | Qi Fu Zhongming Lian Mengya Niu Yaru Huang Yanqiu Ai Long He Dandan Zhang Cuixia Zheng Jian-Jun Yang Lei Wang Dandan Tian | 2024 | Chinese Chemical Letters2024，35，2： | 0 |
| 19 | A Knowledge Survey on Health Education of Echinococcosis Among Students — Ganzi Tibetan Autonomous Prefecture, Sichuan Province, China, 2020显示文摘Summary What is already known about this topic?Previous surveys have mainly focused on how well residents and primary school students have understood the core knowledge of echinococcosis control and are limited in terms of the comprehensiveness of the knowledge category and respondents.What is added by this report?There were some shortcomings in related knowledge of echinococcosis among students,which showed a tendency to know methods but not the rationale.The differences among regions indicated a lack of a unified system for training educators and allocating comprehensive educational material.What are the implications for public health practices?The results of this study provide evidence to potentially help improve health education programs in the new phase of echinococcosis prevention and control in China. | Xu Wang Meihua Fu Qian Wang Wei Li Zeli Danba Shuai Han Xiaozhou He Jianfeng Ba Chumu Luorong Quzhen Jiangyang Yixi Luorong Dali Chunyang Li Dandan Shi Yayi Guan Weiping Wu Ning Xiao | 2022 | China CDC weekly2022，4，8： | 0 |
| 20 | Applications of Bootstrap in Radar Signal Processing显示文摘The bootstrap technique is a powerful method for assessing the accuracy of parameters estimator, that have been widely applied on statistical and signal processing problems. A novel program based on bootstrap for DOA estimation is performed to compared with different number of snapshots in this paper. We have resampled the received signals for 200-1000 times to create new data, therefore the arrival angle is estimated by the music algorithm in the conditions of confidence interval. The demo results show that higher estimation probability and smaller mean square error can be achieved in the situation of fewer snapshots received by passive radar system than that of traditional algorithm. | Lei Liu Dandan Fu Yupu Zhu Dan Su Ming Diao | 2015 | 国际计算机前沿大会会议论文集2015，，1： | 0 |
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