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| 1 | Genome-wide Analysis of Transcriptional Variability in a Large Maize-Teosinte Population显示文摘基因表示规定在控制植物显型和改编起一个重要作用。这里,我们报导对通过 transcriptome 的基因表示变化的一个全面评价大 maize-teosinte 分析试验性的人口。染色体宽的印射识别了 25 ? 660 表示为 17 的量的特点 loci (eQTL )? 311 基因,捕获表示变化的一个崭新的范围。我们发现本地 eQTL 更经常被印射到邻近的基因,显示表示 piggybacking 的一个模式,它因而创造了共同调整的基因簇。在共同调整的基因簇以内的基因趋于有相关功能和分享的染色质修正。远 eQTL 与他们显著地在特定的功能的范畴充实的目标形成了 125 个重要远 eQTL 热点。由集成信息的不同来源,我们为许多新陈代谢的小径识别了通常认为的 trans- 管理者。我们证明 bHLH 抄写因素 R1 和 hexokinase HEX9 可能分别地为 flavonoid 生合成和 glycolysis 充当关键管理者。而且,我们证明驯服或改进显著地影响了全球基因表示,与选择指向的许多基因。特别兴趣,为生合成可能经历了的 benzoxazinoid 的 Bx 基因协调了在玉米和 teosinte 之间的 cis 规章的分叉,并且当玉米与一个不同草食动物社区传播了进适度的环境,使 Bx12 失去活性的 transposon 插入在强壮的选择下面。 | Xufeng Wang Qiuyue Chen Yaoyao Wu Zachary H. Lemmon Guanghui Xu Cheng Huang Yameng Liang Dingyi Xu Dan Li John F. Doebley Feng Tian | 2018 | Molecular Plant2018，11，3： | 7 |
| 2 | piRNAs Can Trigger a Multigenerational Epigenetic Memory in the Germline of C. elegans显示文摘 | Alyson Ashe Alexandra Sapetschnig Eva-Maria Weick Jacinth Mitchell Marloes P. Bagijn Amy C. Cording Anna-Lisa Doebley Leonard D. Goldstein Nicolas J. Lehrbach Jérémie Le Pen Greta Pintacuda Aisa Sakaguchi Peter Sarkies Shawn Ahmed Eric A. Miska | 2012 | Cell2012，，1： | 2 |
| 3 | The Molecular Genetics of Crop Domestication显示文摘 | John F. Doebley Brandon S. Gaut Bruce D. Smith | 2006 | Cell2006，，7： | 2 |
| 4 | The TCP domain: a motif found in proteins regulating plant growth and development 显示文摘 | CUBAS P Lauter N Doebley J | 1999 | Plant Journal1999，18，： | 1 |
| 5 | The Evolution of Apical Dominance in Maize 显示文摘 | DOEBLEY J STEC A HUBBARD L | 1997 | Nature1997，386，3： | 1 |
| 6 | The evolution of apical dominance in maize显示文摘 | DOEBLEY J Stec A Hubbard L | 1991 | Nature1991，386，： | 1 |
| 7 | The TCP domain: a motif found in proteins regulating plant growth and development 显示文摘 | Cubas P Larter N Doebley J | 1999 | Plant J1999，18，2： | 1 |
| 8 | Genetic and morphological analysis of a maize-teosinte F2 population: implications for the origin of maize显示文摘 | Doebley J Stec A Wendel J | 1990 | Proceedings of the National Academy of Sciences1990，87，24： | 1 |
| 9 | The origin of the naked grains of maize显示文摘 | Wang H Waglar TN Li BL Zhao Q Vigouroux Y Faller M Bomblies K Lukens L Doebley JF | | 0，，7051： | 1 |
| 10 | Chloroplast DNA diversity among wild and cultivated members of Cucurbita ( Cucurbitaeeae)显示文摘 | WILSON I4 D DOEBLEY ] DUVALL M | 1992 | Theor Appl Genet1992，84，78： | 1 |
| 11 | The limits of selection during maize domestication显示文摘 | Wang RL Stec A Hey J Lukens L Doebley J | | 0，，： | 1 |
| 12 | Dwarf8 polymorphism associate with variation in flowering time显示文摘 | Thomsberry J M Goodman M M Doebley J | 2001 | Nat Genet2001，28，： | 1 |
| 13 | Expression patterns and mutant phenotype of teosinte branchedl correlate with growth suppression in maize and teosinte 显示文摘 | Hubbard L McSteen P Doebley J | 2002 | Genetics2002，162，： | 1 |
| 14 | The evolution of apical dominance in maize显示文摘 | DOEBLEY J STEC A HUBBARD L | 1997 | Nature1997，386，： | 1 |
| 15 | Maize HapMap2 identifies extant variation from a genome in flux 显示文摘 | Jer-Ming Chia Chi Song Peter J Bradbury Denise Cos- tich Natalia de Leon John Doebley Robert J Elshire Brandon Gaut Laura Geller Jeffrey C Glaubitz Michael Gore Kate E Guill Jim Holland Matthew B Hufford Jinsheng Lai Meng Li Xin Liu Yanli Lu Richard Mc- Combie Rebecca Nelson Jesse Poland Boddupalli M Prasanna Tanja Pyhajarvi Tingzhao Rong Rajandeep S Sekhon Qi Sun Maud I Tenaillon Feng Tian Jun Wang Xun Xu Zhiwu Zhang Shawn M Kaeppler Jef- frey Ross-lbarra Michael D McMullen Edward S Buck- ler Gengyun Zhang Yunbi Xu Doreen Ware | 2012 | Nat Genet2012，，44： | 1 |
| 16 | Dwarf8 polymorphisms associate with variation in flowering time 显示文摘 | Thornsbcrry J M Goodman M M Doebley 5 | 2001 | Nat Genet2001，28，： | 1 |
| 17 | Teosinte branchedl and the origin of maize:evidence for epistasis and the evolution of dominance显示文摘 | DOEBLEY J STEC A GUSTUS C | 1995 | Genetics1995，141，： | 1 |
| 18 | Dwarf 8 polymorphisms associate with variation in flowering time显示文摘 | THORNSBERRY J M GOODMAN M M DOEBLEY J | 2001 | Nature Genetics2001，28，： | 1 |
| 19 | Transcriptional regulators and the evolution of plant form显示文摘 | Doebley J Lukens L | 1998 | The Plant Cell Online1998，10，7： | 1 |
| 20 | Pleiotropic effects of the daplicate maize FLORICAULA/LEAFY genes zff1 and zfl2 on traits under selection durra maize domestication显示文摘 | Bomblies K Doebley J F | 2006 | Gonetics2006，172，1： | 1 |
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