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| 1 | A Chromosome-Level Genome Assembly of Garlic (Allium sativum) Provides Insights into Genome Evolution and Allicin Biosynthesis显示文摘Garlic,an economically important vegetable,spice,and medicinal crop,produces highly enlarged bulbs and unique organosulfur compounds.Here,we report a chromosome-level genome assembly for garlic,with a total size of approximately 16.24 Gb,as well as the annotation of 57561 predicted protein-coding genes,making garlic the first Allium species with a sequenced genome.Analysis of this garlic genome assembly reveals a recent burst of transposable elements,explaining the substantial expansion of the garlic genome.We examined the evolution of certain genes associated with the biosynthesis of allicin and inulin neoseries-type fructans,and provided new insights into the biosynthesis of these two compounds.Furthermore,a large-scale transcriptome was produced to characterize the expression patterns of garlic genes in different tissues and at various growth stages of enlarged bulbs.The reference genome and large-scale transcriptome data generated in this study provide valuable new resources for research on garlic biology and breeding. | Xiudong Sun Siyuan Zhu Ningyang Li Yi Cheng Jing Zhao Xuguang Qiao Li Lu Shiqi Liu Yanzhou Wang Chan Liu Benping Li Wu Guo Shuang Gao Zemao Yang Fu Li Zheng Zeng Qing Tang Yupeng Pan Mengjiao Guan Jian Zhao Xiaomi ng Lu Huanwe n Meng Zhenlin Han Chun she ng Gao Wenkai Jiang Xing Zhao Shilin Tian Jianguang Su Zhihui Cheng Touming Liu | 2020 | Molecular Plant2020，13，9： | 14 |
| 2 | Biosynthetic pathway of terpenoid indole alkaloids in Catharanthus roseus显示文摘Catharanthus roseus 是最广泛地调查的药用的植物之一,它能生产超过 130 碱,包括强大的 antitumor 药 vinblastine 和长春新碱。这里,我们在 C 在 terpenoid 吲哚碱(TIA ) 的 biosynthetic 小径考察最近的进展。涉及这条小径的相应的酶的 roseus,和鉴定和描述。Strictosidine 是在不同 TIA 的生合成的中央中介,它被 secologanin 和 tryptamine 的冷凝作用形成。Secologanin 从 terpenoid (isoprenoid ) 被导出 biosynthetic 小径,当 tryptamine 从吲哚 biosynthetic 被导出时小径。然后各种各样的特定的结束产品被不同线路在下游的过程期间生产。尽管许多基因和相应的酶在这条小径被描绘了,我们整个 TIA biosynthetic 小径上的知识仍然保持大部分未知最新。TIA biosynthetic 小径的完整的说明是一个重要前提在药用的植物理解 TIA 生合成的规定并且由合成生物技术生产珍贵 TIA。 | Xiaoxuan Zhu Xinyi Zeng Chao Sun Shilin Chen | 2014 | Frontiers of Medicine2014，8，3： | 8 |
| 3 | Development of nutritious rice with high zinc/selenium and low cadmium in grains through QTL pyramiding显示文摘Enriching zinc(Zn) and selenium(Se) levels,while reducing cadmium(Cd) concentration in rice grains is of great benefit for human diet and health.Large natural variations in grain Zn, Se, and Cd concentrations in different rice accessions enable Zn/Sebiofortification and Cd-minimization through molecular breeding. Here, we report the development of new elite varieties by pyramiding major quantitative trait loci(QTLs) that significantly contribute to high Zn/Se and low Cd accumulation in grains. A chromosome segment substitution line CSSLGCC7 with the PA64s-derived GCC7 allele in the 93-11 background, exhibited steadily higher Mn and lower Cd concentrations in grains than those of 93-11. This elite chromosome segment substitution line(CSSL) was used as the core breeding material to cross with CSSLs harboring other major QTLs for essential mineral elements, especially CSSLGZC6 for grain Zn concentration and CSSLGSC5 for grain Se concentration. The CSSLGCC7+GZC6 and CSSLGCC7+GSC5 exhibited lower Cd concentration with higher Zn and Se concentrations in grains, respectively. Our study thus provides elite materials for rice breeding targeting high Zn/Se and low Cd concentrations in grains. | Chaolei Liu Shilin Ding Anpeng Zhang Kai Hong Hongzhen Jiang Shenglong Yang Banpu Ruan Bin Zhang Guojun Dong Longbiao Guo Dali Zeng Qian Qian Zhenyu Gao | 2020 | Journal of Integrative Plant Biology2020，62，3： | 7 |
| 4 | NMRCloudQ: a quantum cloud experience on a nuclear magnetic resonance quantum computer显示文摘Cloud-based quantum computing is anticipated to be the most useful and reachable form for public users to experience with the power of quantum. As initial attempts, IBM Q has launched influential cloud services on a superconducting quantum processor in 2016, but no other platforms has followed up yet. Here,we report our new cloud quantum computing service – NMRCloud Q(http://gffzz93b8cbf03a7349b1ho6wk5wvqqv6566xu.ffgz.tsg.suse.edu.cn/zh-hans/),where nuclear magnetic resonance, one of the pioneer platforms with mature techniques in experimental quantum computing, plays as the role of implementing computing tasks. Our service provides a comprehensive software environment preconfigured with a list of quantum information processing packages,and aims to be freely accessible to either amateurs that look forward to keeping pace with this quantum era or professionals that are interested in carrying out real quantum computing experiments in person. In our current version, four qubits are already usable with in average 99.10% single-qubit gate fidelity and 97.15% two-qubit fidelity via randomized benchmaking tests. Improved control precisions as well as a new seven-qubit processor are also in preparation and will be available later. | Tao Xin Shilin Huang Sirui Lu Keren Li Zhihuang Luo Zhangqi Yin Jun Li Dawei Lu Guilu Long Bei Zeng | 2018 | Science Bulletin2018，63，1： | 5 |
| 5 | Realization of multi-wavelength label optical packet switching显示文摘 | Xiao Shilin Zeng Qingii Wang Jianxin | 2003 | IEEE Photonics Technology Letters2003，15，4： | 1 |
| 6 | Two flexible cationic metal-organic frameworks with remarkable stability for CO_(2)/CH4 separation显示文摘Cationic azole-based metal-organic frameworks(MOFs)with remarkable stability and unique pore environment have aroused great research interests.Meanwhile,flexible MOFs which can undergo pore-structure changes upon exposure to external stimuli are ideal materials for gas separation.However,introducing flexibility into the framework of cationic azole-based MOFs is rarely reported.Herein,we synthesized two stable isomorphic cationic MOFs(M-btz-as,M=Co,Ni)based on a linear azole ligand.After activated at high temperature under vacuum,M-btz-ht(M=Co,Ni)were obtained and both MOFs exhibited flexible features in which Co-btz is more flexible than Ni-btz.Different solvent-mediated activation methods were employed to explore their effects on structural flexibility and produced MOFs with different phases.Continuous phase transformation of Co-btz-e was verified by powder X-ray diffraction.In addition,these MOF phases possessed different gas separation abilities affected by their flexible frameworks,and Co-btz-ht exhibited the highest CO_(2)/CH4 separation ability. | Shulin Li Shilin Zeng Yuyang Tian Xiaofei Jing Fuxing Sun Guangshan Zhu | 2021 | Nano Research2021，14，9： | 1 |
| 7 | Microfiltration performance of regenerated cellulose membrane prepared at low temperature for wastewater treatment显示文摘 | Liu Shilin Zeng Jian Tao Dandan | 2010 | Cellulose2010，17，6： | 1 |
| 8 | Identification of medicinal vines by ITS2 using complementary discrimination methods显示文摘 | Zhihua Liu Xu Zeng Dan Yang Guomin Ren Guiyan Chu Zhengrong Yuan Kun Luo Peigen Xiao Shilin Chen | 2012 | Journal of Ethnopharmacology2012，，1： | 1 |
| 9 | Priority-Based Mixed Assembly Supporting Differentiated Service for Optical Burst Switched Networks显示文摘In order to have a better support of differentiated service, we propose Priority-based mixed burst assembly, in which packets of different priorities are assembled in a burst with an assigned proportion, and the priorities are lined in an ascending order in a burst from head to tail. Simulation results show that the proposed scheme performs very well in terms of latency and packet loss probability. | Jianxin Wang, Qingji Zeng, Hao chi, Shenghua Wang, Shilin Xiao, Zhizhong Zhang CBONT of Shanghai Jiaotong University, China 200030 2 Beijing Lyang Technology Co. Ltd. China 100085 | 2003 | 光学学报2003，23，S1： | 1 |
| 10 | Applying DNA barcodes for identification of plant species in the family Araliaceae显示文摘 | Zhihua Liu Xu Zeng Dan Yang Guiyan Chu Zhengrong Yuan Shilin Chen | 2012 | Gene2012，，1： | 1 |
| 11 | Millimeter-wave wireless communications for home network in fiber-to-the-room scenario显示文摘Millimeter-wave(mmWave)technology has been well studied for both outdoor long-distance transmission and indoor short-range communication.In the recently emerging fiber-to-the-room(FTTR)architecture in the home network of the fifth generation fixed networks(F5G),mmWave technology can be cascaded well to a new optical network terminal in the room to enable extremely high data rate communication(i.e.,>10 Gb/s).In the FTTR+mmWave scenario,the rapid degradation of the mmWave signal in long-distance transmission and the significant loss against wall penetration are no longer the bottlenecks for real application.Moreover,the surrounding walls of every room provide excellent isolation to avoid interference and guarantee security.This paper provides insights and analysis for the new FTTR+mmWave architecture to improve the customer experience in future broadband services such as immersive audiovisual videos. | Chao HE Zhixiong REN Xiang WANG Yan ZENG Jian FANG Debin HOU Le KUAI Rong LU Shilin YANG Zhe CHEN Jixin CHEN | 2021 | Frontiers of Information Technology & Electronic Engineering2021，22，4： | 1 |
| 12 | Self-similar traffic analysis in optical burst assembly显示文摘This paper investigates the traffic properties before and after assembly at edge node of Ethernet over optical burst switching (OBS) network for the first time. Burst and inter-arrival time distributions are simulated under time-based and length-based assembly schemes. Self-similar traffic Hurst parameter is compared through R/S and V/T plot. Finally three self-similar traffic generating methods are given. Simulation results demonstrate that, multi-source traffic increases self-similar degree, however after assembly, time-based scheme can decrease self-similar degree, and aggregated burst size is close to Gaussian distribution. Length-based method has no effects on the self-similarity of input traffic. RMD is fit for study of burst network with large self-similarity. | 隋志成 Zeng Qingji Xiao Shilin | 2005 | High Technology Letters2005，11，4： | 0 |
| 13 | Local stable and unstable sets for positive entropy C;dynamical systems显示文摘For any C;diffeomorphism on a smooth compact Riemannian manifold that admits an ergodic measure with positive entropy,a lower bound of the Hausdorff dimension for the local stable and unstable sets is given in terms of the measure-theoretic entropy and the maximal Lyapunov exponent.The main line of our approach to this result is under the setting of topological dynamical systems,which is also applicable to infinite-dimensional C;dynamical systems. | Shilin Feng Rui Gao Wen Huang Zeng Lian | 2022 | Science China Mathematics2022，65，1： | 0 |
| 14 | Quantum state tomography for generic pure states显示文摘We examine the problem of whether a multipartite pure quantum state can be uniquely determined by its reduced density matrices.We show that a generic pure state in three party Hilbert space HA■HB■HC, where dim(HA) = 2 and dim(HB) = dim(HC), can be uniquely determined by its reduced states on subsystems HA■HB and HA■HC. Then, we generalize the conclusion to the case that dim(H_1) > 2. As a corollary, we show that a generic N-qudit pure quantum state is uniquely determined by only two of its[(N+1)/2]-particle reduced density matrices. Furthermore,our results indicate a method to uniquely determine a generic N-qudit pure state of dimension D = d^N with only O(D) local measurements, which is an improvement compared to the previous known approach that uses O(D log^2 D) or O(D log D) local measurements. | ShiLin Huang JianXin Chen YouNing Li Bei Zeng | 2018 | Science China(Physics,Mechanics & Astronomy)2018，61，11： | 0 |
| 15 | Value of Optical Bypass in Packet Ring Networks显示文摘This paper firstly examines the value of optical bypass scheme in packet ring networks. An Integer Linear Program (ILP) formulation is presented and analytical results under different traffic patterns are given. | Xu Zhu, Qingji Zeng, Fengqing Liu, Xudong Yang, Shilin Xiao R&D Center for Broadband Optical Networking, Shanghai Jiaotong University, Shanghai 200030, P.R.China | 2003 | 光学学报2003，23，S1： | 0 |
| 16 | Design of Survivable Routing with and without Wavelength-continuity Constraints in WDM Networks显示文摘The problem of routing logical links (lightpaths) on a physical topology of WDM networks in a way that the logical topology remains connected in the event of single physical link failure is called survivable routing. This paper addresses the survivable routing problem with and without wavelength-continuity constraints by proposing a new Integer Linear Programming (ILP) algorithm, which is based on a simplified necessary and sufficient condition. Numerical results are given and discussed to show that survivable routing solutions of most logical topologies can be found by the algorithm of the authors. Furthermore, comparing with other similar methods, the above algorithm can find out a survivable solution in much shorter time, and it works especially well with sparse-connected logical topologies. The impact of wavelength-continuity constraints and the other factors that influence the probability to find out a survivable solution are also discussed in the paper. | 刘逢清 Zeng Qingji ZHU Xu YANG Xudong Xiao Shilin | 2004 | High Technology Letters2004，10，4： | 0 |
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