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| 1 | A Chromosome-Scale Genome Assembly of Paper Mulberry(Bmussonetia papyrifera)Provides New Insights into Its Forage and Papermaking Usage显示文摘Paper mulberry(Broussonetia papyrifera)is a well-known woody tree historically used for Cai Lun papermaking,one of the four great inventions of ancient China.More recently,Paper mulberry has also been used as forage to address the shortage of feedstuff because of its digestible crude fiber and high protein contents.In this study,we obtained a chromosome-scale genome assembly for Paper mulberry using integrated approaches,including Illumina and PacBio sequencing platform as well as Hi-C,optical,and genetic maps.The assembled Paper mulberry genome consists of 386.83 Mb,which is close to the estimated size,and 99.25%(383.93 Mb)of the assembly was assigned to 13 pseudochromosomes.Comparative genomic analysis revealed the expansion and contraction in the flavonoid and lignin biosynthetic gene families,respectively,accounting for the enhanced flavonoid and decreased lignin biosynthesis in Paper mulberry.Moreover,the increased ratio of syringyl-lignin to guaiacyl-lignin in Paper mulberry underscores its suitability for use in medicine,forage,papermaking,and barkcloth making.We also identified the rootassociated microbiota of Paper mulberry and found that Pseudomonas and Rhizobia were enriched in its roots and may provide the source of nitrogen for its stems and leaves via symbiotic nitrogen fixation.Collectively,these results suggest that Paper mulberry might have undergone adaptive evolution and recruited nitrogen-fixing microbes to promote growth by enhancing flavonoid production and altering lignin monomer composition.Our study provides significant insights into genetic basis of the usefulness of Paper mulberry in papermaking and barkcloth making,and as forage.These insights will facilitate further domestication and selection as well as industrial utilization of Paper mulberry worldwide. | Xianjun Peng Hui Liu Peilin Chen Feng Tang Yanmin Hu Fenfen Wang Zhi Pi Meiling Zhao Naizhi Chen Hui Chen Xiaokang Zhang Xueqing Yan Min Liu Xiaojun Fu Guofeng Zhao Pu Yao Lili Wang He Dai Xuming Li Wei Xiong Wencai Xu Hongkun Zheng Haiyan Yu Shihua Shen | 2019 | Molecular Plant2019，12，5： | 18 |
| 2 | Ni(OH)_(2) nanoparticles encapsulated in conductive nanowire array for high-performance alkaline seawater oxidation显示文摘Design and development of high-efficiency and durable oxygen evolution reaction(OER)electrocatalysts is crucial for hydrogen production from seawater splitting.Herein,we report the in situ electrochemical conversion of a nanoarray of Ni(TCNQ)2(TCNQ=tetracyanoquinodimethane)on graphite paper into Ni(OH)_(2) nanoparticles confined in a conductive TCNQ nanoarray(Ni(OH)_(2)-TCNQ/GP)by anode oxidation.The Ni(OH)_(2)-TCNQ/GP exhibits high OER performance and demands overpotentials of 340 and 382 mV to deliver 100 mA·cm^(−2) in alkaline freshwater and alkaline seawater,respectively.Meanwhile,the Ni(OH)_(2)-TCNQ/GP also demonstrates steady long-term electrochemical durability for at least 80 h under alkaline seawater. | Longcheng Zhang Jiaqian Wang Pengyu Liu Jie Liang Yongsong Luo Guanwei Cui Bo Tang Qian Liu Xuedong Yan Haigang Hao Meiling Liu Rui Gao Xuping Sun | 2022 | Nano Research2022，15，7： | 5 |
| 3 | A FAST HIGH ORDER METHOD FOR ELECTROMAGNETIC SCATTERING BY LARGE OPEN CAVITIES显示文摘在这份报纸,从在一架无限的地面飞机嵌入的一个矩形的大开的洞的电磁的散布被学习。由介绍一个非局部的人工的边界条件,来自开的洞的散布问题被归结为一个围住的领域问题。有限差别计划然后被求婚到的 A 协议第四顺序分离在矩形的领域散布模型的洞,和一个特殊处理被强制接近边界调节,它让截断错误到达 O (h [4 ]) 在全部计算领域。一个快算法,利用分离 Fourier 转变在水平并且在垂直方向的 Gaussian 消除,被采用,它把分离系统归结为一个小得多的接口系统。有效 pre-conditioner 被介绍让 BICGstab 反复的解答者解决这个接口系统。数字结果表明建议方法的显著精确性和效率。特别地,为大波浪数字解决洞模型直到 600 能被用来。[从作者抽象] | Meiling Zhao Zhonghua Qiao Tao Tang | 2011 | Journal of Computational Mathematics2011，29，3： | 4 |
| 4 | In vitro expansion of human sperm through nuclear transfer显示文摘Dear Editor,Mammalian haploid embryonic stem cells(haESCs)represent an ideal tool for genetic analysis due to the presence of only one set of genetic materials.HaESCs fall into two readily distinguishable groups based on their genome origins:parthenogenetic haESCs(PG-haESCs)that are derived from oocyte-originated parthenogenetic embryos and androgenetic haESCs(AG-haESCs)that are produced through sperm nuclear transfer.Both PG-and AGhaESCs are feasible for delineating genome function at cellular level in vitro.Importantly,AG-haESCs can be used as a sperm replacement and applied to deciphering gene function at organismal level when combined with CRISPR-Cas9 technology.1 However,while PG-haESCs have been generated from both rodent and primates,2-5 AG-haESCs can only be obtained in rodent to date. | Xiaoyu Merlin Zhang Keliang Wu Yuxuan Zheng Han Zhao Junpeng Gao Zhenzhen Hou Meiling Zhang Jiaoyang Liao Jingye Zhang Yuan Gao Yuanyuan Li Lin Li Fuchou Tang Zi-Jiang Chen Jinsong Li | 2020 | Cell Research2020，30，4： | 3 |
| 5 | A novel deep generative modeling-based data augmentation strategy for improving short-term building energy predictions显示文摘Short-term building energy predictions serve as one of the fundamental tasks in building operation management.While large numbers of studies have explored the value of various supervised machine learning techniques in energy predictions,few studies have addressed the potential data shortage problem in developing data-driven models.One promising solution is data augmentation,which aims to enrich existing building data resources for reliable predictive modeling.This study proposes a deep generative modeling-based data augmentation strategy for improving short-term building energy predictions.Two types of conditional variational autoencoders have been designed for synthetic energy data generation using fully connected and one-dimensional convolutional layers respectively.Data experiments have been designed to evaluate the value of data augmentation using actual measurements from 52 buildings.The results indicate that conditional variational autoencoders are capable of generating high-quality synthetic data samples,which in turns helps to enhance the accuracy in short-term building energy predictions.The average performance enhancement ratios in terms of CV-RMSE range between 12%and 18%.Practical guidelines have been obtained to ensure the validity and quality of synthetic building energy data.The research outcomes are valuable for enhancing the robustness and reliability of data-driven models for smart building operation management. | Cheng Fan Meiling Chen Rui Tang Jiayuan Wang | 2022 | Building Simulation2022，15，2： | 2 |
| 6 | Characteristics of oral methicillin-resistant Staphylococcus epidermidis isolated from dental plaque显示文摘The oral microbial community is widely regarded as a latent reservoir of antibiotic resistance genes. This study assessed the molecular epidemiology, susceptibility profile, and resistance mechanisms of 35 methicillin-resistant Staphylococcus epidermidis(MRSE) strains isolated from the dental plaque of a healthy human population. Broth microdilution minimum inhibitory concentrations(MICs) revealed that all the isolates were nonsusceptible to oxacillin and penicillin G. Most of them were also resistant to trimethoprim(65.7%) and erythromycin(54.3%). The resistance to multiple antibiotics was found to be largely due to the acquisition of plasmid-borne genes. The mec A and dfr A genes were found in all the isolates, mostly dfr G(80%), aac A-aph D(20%), aad D(28.6%), aph A3(22.9%), msr A(5.7%), and the erm C gene(14.3%). Classical mutational mechanisms found in these isolates were mainly efflux pumps such as qac A(31.4%), qac C(25.7%), tet K(17.1%), and nor A(8.6%). Multilocus sequence type analysis revealed that sequence type 59(ST59) strains comprised 71.43% of the typed isolates, and the e BURST algorithm clustered STs into the clonal complex 2-II(CC2-II). The staphyloccoccal cassette chromosome mec(SCCmec) type results showed that 25(71.43%) were assigned to type IV. Moreover, 88.66% of the isolates were found to harbor six or more biofilm-associated genes. The aap, atl E, embp, sdr F, and IS256 genes were detected in all 35 isolates. This research demonstrates that biofilm-positive multipleantibiotic-resistant ST59-SCCmec IV S. epidermidis strains exist in the dental plaque of healthy people and may be a potential risk for the transmission of antibiotic resistance. | Boyu Tang Tao Gong Yujia Cui Lingyun Wang Chao He Miao Lu Jiamin Chen Meiling Jing Anqi Zhang Yuqing Li | 2020 | International Journal of Oral Science2020，12，2： | 2 |
| 7 | Characterization and Expression of Ammonium Transporter in Peach (Prunus persica) and Regulation Analysis in Response to External Ammonium Supply显示文摘As the preferred nitrogen(N)source,ammonium(NH_(4)^(+))contributes to plant growth and development and fruit quality.In plants,NH 4+uptake is facilitated by a family of NH_(4)^(+) transporters(AMT).However,the molecular mechanisms and functional characteristics of the AMT genes in peach have not been mentioned yet.In this present study,excess NH_(4)^(+) stress severely hindered shoot growth and root elongation,accompanied with reduced mineral accumulation,decreased leaf chlorophyll concentration,and stunned photosynthetic performance.In addition,we identified 14 putative AMT genes in peach(PpeAMT).Expression analysis showed that PpeAMT genes were differently expressed in peach leaves,stems and roots,and were distinctly regulated by external NH_(4)^(+) supplies.Putative cis-elements involved in abiotic stress adaption,Ca^(2+) response,light and circadian rhythms regulation,and seed development were observed in the promoters of the PpeAMT family genes.Phosphorylation analysis of residues within the C-terminal of PpeAMT proteins revealed many conserved phosphorylation residues in both the AMT1 and AMT2 subfamily members,which could potentially play roles in controlling the NH 4+transport activities.This study provides gene resources to study the biological function of AMT proteins in peach,and reveals molecular basis for NH_(4)^(+) uptake and N nutrition mechanisms of fruit trees. | Meiling Tang Yuhe Li Yahui Chen Lei Han Hongxia Zhang Zhizhong Song | 2020 | Phyton-International Journal of Experimental Botany2020，89，4： | 2 |
| 8 | Cell-free DNA derived from cancer cells facilitates tumor malignancy through Toll-like receptor 9 signaling-triggered interleukin-8 secretion in colorectal cancer显示文摘 | Zhengchuan Niu Wentao Tang Tianyu Liu Pingping Xu Dexiang Zhu Meiling Ji Wenbai Huang Li Ren Ye Wei Jianmin Xu | 2018 | Acta Biochimica et Biophysica Sinica2018，50，10： | 1 |
| 9 | An efficient method and system for simultaneously measuring the performance of vast scintillating materials显示文摘A method and system for automatically and simultaneously measuring the light output of multiple scintillators,or each scintillating unit of an array,were developed.Using a large area flat panel PSPMT H8500,the light output and energy resolution were obtained automatically by comparing with reference scintillators or array using an Energy Table,Look-up Table and energy spectrum data.The aim of developing an efficient performance evaluation of scintillators was achieved.Using the method,a scintillator performance testing system was set up and six LYSO crystals and a 3×3 LYSO array were measured.The results showed that the light output and energy resolution were accurately measured automatically.The deviation of repeat measurements for the same sample was not more than 2%,and the nonlinear deviation of the system was not more than 3%.The system is suitable for measuring the performance of crystals,especially where the mass measurement of crystals and arrays is required. | CHEN Yan ZHANG Zhiming LI Daowu SHUAI Lei HUANG Xianchao TANG Haohui LI Ting ZHUANG Kai WANG yingjie LIU Yantao ZHANG Yiwen CHAI Pei LIU Shuangquan ZHU Meiling WANG Baoyi WEI Long | 2012 | Nuclear Science and Techniques2012，23，3： | 0 |
| 10 | Free Vibration Analysis of Single-Layered Graphene Sheets Based on a Continuum Model显示文摘 | Jinbao Wang Meiling Tian Xiaoqiao He Zhibo Tang | 2014 | 应用物理前沿(中英文版)2014，2，1： | 0 |
| 11 | The haplotype-resolved T2T genome of teinturier cultivar Yan73 reveals the genetic basis of anthocyanin biosynthesis in grapes显示文摘Teinturier grapes are characterized by the typical accumulation of anthocyanins in grape skin,flesh,and vegetative tissues,endowing them with high utility value in red wine blending and nutrient-enriched foods developing.However,due to the lack of genome information,the mechanism involved in regulating teinturier grape coloring has not yet been elucidated and their genetic utilization research is still insufficient.Here,the cultivar‘Yan73’was used for assembling the telomere-to-telomere(T2T)genome of teinturier grapes by combining the High Fidelity(HiFi),Hi-C and ultralong Oxford Nanopore Technologies(ONT)reads.Two haplotype genomes were assembled,at the sizes of 501.68 Mb and 493.38 Mb,respectively.In the haplotype 1 genome,the transposable elements(TEs)contained 32.77%of long terminal repeats(LTRs),while in the haplotype 2 genome,31.53%of LTRs were detected in TEs.Furthermore,obvious inversions were identified in chromosome 18 between the two haplotypes.Transcriptome profiling suggested that the gene expression patterns in‘Cabernet Sauvignon’and‘Yan73’were diverse depending on tissues,developmental stages,and varieties.The transcription program of genes in the anthocyanins biosynthesis pathway between the two cultivars exhibited high similarity in different tissues and developmental stages,whereas the expression levels of numerous genes showed significant differences.Compared with other genes,the expression levels of VvMYBA1 and VvUFGT4 in all samples,VvCHS2 except in young shoots and VvPAL9 except in the E-L23 stage of‘Yan73’were higher than those of‘Cabernet Sauvignon’.Further sequence alignments revealed potential variant gene loci and structure variations of anthocyanins biosynthesis related genes and a 816 bp sequence insertion was found in the promoter of VvMYBA1 of‘Yan73’haplotype 2 genome.The‘Yan73’T2T genome assembly and comparative analysis provided valuable foundations for further revealing the coloring mechanism of teinturier grapes and the genetic improvement of grape coloring traits. | Kekun Zhang Mengrui Du Hongyan Zhang Xiaoqian Zhang Shuo Cao Xu Wang Wenrui Wang Xueqiang Guan Penghui Zhou Jin Li Wenguang Jiang Meiling Tang Qiuling Zheng Muming Cao Yongfeng Zhou Keqin Chen Zhongjie Liu Yulin Fang | 2023 | Horticulture Research2023，10，11： | 0 |
| 12 | Biomimetic microchannel network with functional endothelium formed by sacrificial electrospun fibers inside 3D gelatin methacryloyl(GelMA)hydrogel models显示文摘Three-dimensional(3D)hydrogel models play a crucial role in tissue engineering for promoting tissue regeneration.A biomimetic microchannel network system in the 3D hydrogel model is necessary for optimal cellular function.This report describes the preparation of a biomimetic hydrogel scaffold with an internal microchannel network,using electrospinning techniques and the sacrificial template method for 3D cell culture.Microchannels and cavities were created within the gelatin methacryloyl(GelMA)hydrogel by sacrificing polyvinyl alcohol(PVA)electrospun fibers(>10µm),resulting in the creation of microvessel-like channels.Mechanical characterizations,swelling properties,and biodegradation analysis were conducted to investigate the feasibility of a biomimetic microchannel network hydrogel scaffold for 3D cell culture applications.Compared to pure GelMA hydrogel,the hydrogel with microchannels promoted cell proliferation,adhesion,and endothelial tube formation.Moreover,the results confirmed that the biomimetic microchannel network scaffold had a major impact on the distribution and arrangement of human umbilical vein endothelial cells(HUVECs)and can enable the formation of artificial microvasculature by the culture of HUVECs and cell media perfusion. | Haoyu SUN Haiyang MA Li WANG Yang LIU Tian HOU Wenjie TANG Qing YU Meiwen AN Meiling WEN | 2024 | Journal of Zhejiang University-Science A(Applied Physics & Engineering)2024，25，1： | 0 |
| 13 | PREPARATION OF HIGH T_(c) Pb-DOPED Bi-BASED SUPERCONDUCTING AMORPHOUS SOLID显示文摘The Pb-doped Bi-based amorphous solid has been prepared by the anvil quenching method from the melt.After annealing,we obtained the dense superconductor with onset and zero resistance temperature at 120K and 107K,respectively.X-ray powder diffraction(XRD)and selected area electron diffract ion(SAED)analysis show that there is mainly high Tc phase(2223 phase)in the sample,and scanning electron microscopy(SEM)observation of the surface of the sample reveals that the needle-like grain abound in sample.Energy dispersive analysis of X-ray(EDAX)indicates that the average composition of grains is Bi_(2)Pb_(0.3)Sr_(1.3)Ca_(1.7)Cu_(2.3)O_(δ). | CHEN Meiling LI Xiaoge WANG Keyi LI Shuzhen XU Shihong WU Chengjiu TANG Hongao | 1990 | Chinese Physics Letters1990，7，3： | 0 |
| 14 | An ultra low-input method for global RNA structure probing uncovers Regnase-1-mediated regulation in macrophages显示文摘To enable diverse functions and precise regulation,an RNA sequence often folds into complex yet distinct structures in different cellular states.Probing RNA in its native environment is essential to uncovering RNA structures of biological contexts.However,current methods generally require large amounts of input RNA and are challenging for physiologically relevant use.Here,we report smartSHAPE,a new RNA structure probing method that requires very low amounts of RNA input due to the largely reduced artefact of probing signals and increased efficiency of library construction.Using smartSHAPE,we showcased the profiling of the RNA structure landscape of mouse intestinal macrophages upon inflammation,and provided evidence that RNA conformational changes regulate immune responses.These results demonstrate that smartSHAPE can greatly expand the scope of RNA structure-based investigations in practical biological systems,and also provide a research paradigm for the study of post-transcriptional regulation. | Meiling Piao Pan Li Xiaomin Zeng Xi-Wen Wang Lan Kang Jinsong Zhang Yifan Wei Shaojun Zhangas Lei Tang Jianghui Zhu Chun Kit Kwok Xiaoyu Hu Qiangfeng Cliff Zhang | 2022 | Fundamental Research2022，2，1： | 0 |
| 15 | Long-range ordered porous carbon:A new carbon constructed by connecting C_(60)cages显示文摘Carbon is a versatile element in the Periodic Table and can bind itself to many polymorphs through various bonding forms(e.g.,sp,sp2,and sp3 hybridizations)[1].Based on structural periodicity,carbon materials can be classified into crystalline or amorphous[2].For example,graphene,diamond and graphite are well-known crystalline carbon materials with different periodic binding motifs in the carbon atom networks[3‒5].By contrast,the active carbons featured with high porosity are the typical amorphous carbons in which the carbon atoms are arranged in a disordered fashion[6]. | Yibing Yang Meiling Tang Zhenyu Zhang Shaozhuan Huang Shuilin Wu | 2023 | Nano Research Energy2023，2，2： | 0 |
| 16 | Double spatial confinement on ruthenium nanoparticles inside carbon frameworks as durable catalysts for a quasi-solid-state Li–O_(2) battery显示文摘The rational design of large-area exposure,nonagglomeration,and longrange dispersion of metal nanoparticles(NPs)in the catalysts is critical for the development of energy storage and conversion systems.Little attention has been focused on modulating and developing catalyst interface contact engineering between a carbon substrate and dispersed metal.Here,a highly dispersed ultrafine ruthenium(Ru)NP strategy by double spatial confinement is proposed,that is,incorporating directed growth of metal–organic framework crystals into a bacterial cellulose templating substrate to integrate their respective merits as an excellent electrocatalytic cathode catalyst for a quasi-solid-state Li–O_(2) battery.The porous carbon matrix with highly dispersed ultrafine Ru NPs is well designed and used as cathode catalysts in a Li–O_(2) battery,demonstrating a high discharge areal capacity of 6.82 mAh cm^(–2) at 0.02 mA cm^(–2),a high-rate capability of 4.93 mAh cm^(–2) at 0.2 mA cm^(–2),and stable discharge/charge cycling for up to 500 cycles(2000 h)with low overpotentials of~1.4 V.This fundamental understanding of the structure–performance relationship demonstrates a new and promising approach to optimize highly efficient cathode catalysts for solid-state Li–O_(2) batteries. | Meiling Wang Ying Yao Feiyang Yang Zhenwu Tang Jingjie Ren Cunzhong Zhang Feng Wu Xiangke Wang | 2023 | Carbon Energy2023，5，8： | 0 |
| 17 | Effects of multi-sequence combination forces on creep characteristics of bales during wheat harvesting显示文摘During the baling operation,the wheat stalks are subjected to various mechanisms in the baler and the main form is compression.After the wheat stem is forced by a combination of the threshing cylinder,it needs to be formed under the action of straw baler and meet transport requirements.This paper mainly studies the properties of wheat stalks when baling,and proposes the application of the creep after-effect theory during the baling process.The tension-compression tester was used to perform a 50 mm stalk mechanical test,50 mm stalk static pressure test,35 mm×40 mm×50 mm stalk module static pressure test and bale static pressure test.The measured elastic modulus of the stem sample was 7.59 MPa,and the elastic modulus of the inner core of the stem was 8.24 MPa.The return curve of the single stalk and the bale is consistent with the initial creep and steady-state creep in the creep after-effect theory.A logarithmic function was used for fitting of the first stage with coefficient of determination R2=0.8364,and a linear function was used for fitting of the second stage with coefficient of determination R2=0.9921.The high water content static pressure test suggests that the load in the loading direction is the coupled load of the working load of the hydraulic cylinder and the internal stress of the bale.When harvesting wheat stalks with high moisture content,the density parameter of the bale can be appropriately increased while the load parameter of the hydraulic cylinder can be considered unchanged or even reduced.The adjustment of density and load can still ensure the forming quality of the bale. | Zhong Tang Yaquan Liang Ben Zhang Meiling Wang Hao Zhang Yaoming Li | 2021 | International Journal of Agricultural and Biological Engineering2021，14，5： | 0 |
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