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25篇 您的检索式：作者名="Matukumalli"

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	题名	作者	年代	出处	被引量
1	SNP discovery and allele frequency es- timation by deep sequencing of reduced representation libraries显示文摘	VAN TASSELL CP SMITH TP MATUKUMALLI LK	2008	Nat Method2008，5，3：	1
2	SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries显示文摘	Van Tassell C P Smith T P L Matukumalli L K eta\|	2008	Nature Methods2008，5，3：	1
3	De- velopment and characterization of a high density SNP genotyping as- say for cattle显示文摘	MATUKUMALLI L K LAWLE C T SCHNABEL R D	2009	PLoS One2009，4，4：	1
4	Discovery and profiling of bovine mieroRNAs from immune-related and embryonic tissues 显示文摘	Coutinho L L Matukumalli L K Sonstegard T S	2007	Physiol Genomics2007，29，1：	1
5	Discovery and profiling of bovine microRNAs from immune - related and embryonic tissues显示文摘	COUTINHO L L MATUKUMALLI L K SONSTEGARD T S	2007	Physiol C enomics2007，14，1：	1
6	A soybean transcript map: gene distribution, haplotype and single-nucleotide polymorphism analysis显示文摘	Choi I Y Hyten D L Matukumalli L K	2007	Genetics2007，176，1：	1
7	A soy- bean transcript map: gene distribution, haplotype and single - nucleotide polymorphism analysis 显示文摘	Choi I Y Hyten D L Matukumalli L K	2007	Genetics2007，176，：	1
8	Application of machine learning in SNP discovery显示文摘	Matukumalli L K Grefenstette J J Hyten D L	2006	BMC Bioinformatics2006，7，4：	1
9	SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries显示文摘	van Tassell CP Smith TP Matukumalli LK Taylor JF Schnabel RD Lawley CT Haudenschild CD Moore SS Warren WC Sonstegard TS		0，，03：	1
10	A soybean transcript map: Gene distribution, haplotype and single-nucleotide polymorphism analysis显示文摘	Choi I Y Hyten D L Matukumalli L K	2007	Genetics2007，176，1：	1
11	Discovery and profiling of bovine microRNAs from immune - related and embryonic tissues 显示文摘	COUTINHO L L MATUKUMALLI L K SONSTEGARD T S	2007	Physiol Genomies2007，29，1：	1
12	A high density integrated genetic linkage map of soybean and the development of a 1536 universal soy linkage panel for quantitative trait locus mapping 显示文摘	Hyten D L Choi I Y Qijian S Specht J E Carter T E Shoemaker R C Hwang E Y Matukumalli L K Cregan P B	2010	Crop Science2010，50，3：	1
13	Discovery and profiling of bovine microRNAs from immune-related and embryonic tis- sues 显示文摘	COUTINBO L L MATUKUMALLI L K SONSTE- GARD T S	2007	Physiological Genomics2007，29，：	1
14	SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries 显示文摘	Van Tassell CP Smith TPL Matukumalli LK Taylor JF Schnabel RD Taylor Lawley C Haudenschild CD Moore SS Warren WC and Sonstegard TS	2008	Nat Methods2008，5，：	1
15	SNP dis- covery and allele frequency estimation by deep sequencing of reduced representation libraries 显示文摘	Van Tassell CP Smith TP Matukumalli LK	2008	Nat Methods2008，5，：	1
16	SNP-PHAGE-High throughput SNP discovery pipeline 显示文摘	Matukumalli L K Grefenstette J J Hyten D L	2006	BMCBioinformatics2006，7，：	1
17	SNP discovery and allele frequency estimation by deep sequencingof reduced representation libraries 显示文摘	VAN TASSELL C P SMITH T P MATUKUMALLI L K	2008	Nat Methods2008，5，3：	1
18	Identification of Conserved Regulatory Elements in Mammalian Promoter Regions:A Case Study Using the PCK1 Promoter显示文摘A systematic phylogenetic footprinting approach was performed to identify con-served transcription factor binding sites (TFBSs) in mammalian promoter regions using human,mouse and rat sequence alignments. We found that the score dis-tributions of most binding site models did not follow the Gaussian distribution required by many statistical methods. Therefore,we performed an empirical test to establish the optimal threshold for each model. We gauged our computational predictions by comparing with previously known TFBSs in the PCK1 gene pro-moter of the cytosolic isoform of phosphoenolpyruvate carboxykinase,and achieved a sensitivity of 75% and a specificity of approximately 32%. Almost all known sites overlapped with predicted sites,and several new putative TFBSs were also identified. We validated a predicted SP1 binding site in the control of PCK1 tran-scription using gel shift and reporter assays. Finally,we applied our computational approach to the prediction of putative TFBSs within the promoter regions of all available RefSeq genes. Our full set of TFBS predictions is freely available at http://gffzze5f7659b97c04080hfnxnbcqxwqb66uf9.ffgz.tsg.suse.edu.cn/tfbsConsSites.	George E. Liui Matthew T. Weirauch Curtis P. Van Tassell Robert W. Li Tad S. Sonstegard LakshmiK. Matukumal Erin E. Connor Richard W. Hanson Jianqi Yang	2008	Genomics, Proteomics & Bioinformatics2008，6，3：	1
19	SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries显示文摘	Van Tassell C P Smith T P Matukumalli L K	2008	Nature Methods2008，5，：	1
20	Discovery and profiling of bovine micro RNAs from immune-related and embryonic tissues显示文摘	COUTINHO L L MATUKUMALLI L K SONSTEGARD T S	2007	Physiol Genomics2007，29，1：	1

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