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| 1 | Evolution and molecular epidemiology of foot-and-mouth disease virus in China显示文摘Foot-and-mouth disease (FMD),caused by foot-and-mouth disease virus (FMDV),is considered one of the most important viral diseases of cloven-hoofed animals,causing severe economic losses in affected regions of the world.Three serotypes (A,O,and Asia 1) of FMDV have been identified in China since 1958.In addition,the occurrence of novel subtypes within these serotypes has made the epidemiology of FMDV more complicated over the last few years.In this review,we summarize the history and the current epidemiological situation in China,genetic diversity (e.g.,quasispecies dynamics,antigenic heterogeneity,and functional constraints),intertypic recombination,and the evidence for positive selection of different FMDV serotypes.We also assess these genetic data to understand the origin,evolution,and transmission of FMDV,the findings of which may be useful in developing control measures for future epidemics. | BAI XingWen LI PingHua BAO HuiFang LIU ZaiXin LI Dong LU ZengJun CAO YiMei SHANG YouJun SHAO JunJun CHANG HuiYun LUO JianXun LIU XiangTao | 2011 | Chinese Science Bulletin2011，56，21： | 7 |
| 2 | Complete nucleotide sequence of a Chinese serotype Asia1 vaccine strain of foot-and-mouth disease virus显示文摘 | Junzheng Du Huiyun Chang Guozheng Cong Junjun Shao Tong Lin Youjun Shang Zaixin Liu Xiangtao Liu Xuepeng Cai Qingge Xie | 2007 | Virus Genes2007，，3： | 1 |
| 3 | The First High-quality Reference Genome of Sika Deer Provides Insights into High-tannin Adaptation显示文摘Sika deer are known to prefer oak leaves,which are rich in tannins and toxic to most mammals;however,the genetic mechanisms underlying their unique ability to adapt to living in the jungle are still unclear.In identifying the mechanism responsible for the tolerance of a highly toxic diet,we have made a major advancement by explaining the genome of sika deer.We generated the first high-quality,chromosome-level genome assembly of sika deer and measured the correlation between tannin intake and RNA expression in 15 tissues through 180 experiments.Comparative genome analyses showed that the UGT and CYP gene families are functionally involved in the adaptation of sika deer to high-tannin food,especially the expansion of the UGT family 2 subfamily B of UGT genes.The first chromosome-level assembly and genetic characterization of the tolerance to a highly toxic diet suggest that the sika deer genome may serve as an essential resource for understanding evolutionary events and tannin adaptation.Our study provides a paradigm of comparative expressive genomics that can be applied to the study of unique biological features in non-model animals. | Xiumei Xing Cheng Ai Tianjiao Wang Yang Li Huitao Liu Pengfei Hu Guiwu Wang Huamiao Liu Hongliang Wang Ranran Zhang Junjun Zheng Xiaobo Wang Lei Wang Yuxiao Chang Qian Qian Jinghua Yu Lixin Tang Shigang Wu Xiujuan Shao Alun Li Peng Cui Wei Zhan Sheng Zhao Zhichao Wu Xiqun Shao Yimeng Dong Min Rong Yihong Tan Xuezhe Cui Shuzhuo Chang Xingchao Song Tongao Yang Limin Sun Yan Ju Pei Zhao Huanhuan Fan Ying Liu Xinhui Wang Wanyun Yang Min Yang Tao Wei Shanshan Song Jiaping Xu Zhigang Yue Qiqi Liang Chunyi Li Jue Ruan Fuhe Yang | 2023 | Genomics, Proteomics & Bioinformatics2023，21，1： | 1 |
| 4 | ACACB is a novel metabolism-related biomarker in the prediction of response to cetuximab therapy in metastatic colorectal cancer显示文摘Cetuximab is one of the most valuable targeted therapy monoclonal antibodies in the treatment of metastatic colorectal cancer(CRC).However,the mechanisms affecting cetuximab resistance in CRC treatment remain unclear.Metabolism,especially fatty acid metabolism,has been reported to play an important role in tumor treatment.The correlation between cetuximab resistance and metabolism and whether it can be a new biomarker to evaluate the sensitivity of cetuximab in CRC treatment still need to be further explored.In this study,we perform a comprehensive analysis to confirm the relationship between fatty acid metabolism and cetuximab resistance,and the differentially expressed genes(DEGs)related to cetuximab drug resistance in CRC are screened by bioinformatics technology.We find that acetyl-CoA carboxylase beta(ACACB),ADH1C,CES1,MGLL,FMO5,and GPT are the hub DEGs,and ACACB is the most important biomarker among them.In addition,we systematically analyze the role of ACACB in the tumorigenesis of CRC,including tissue expression,CRC cell growth,cetuximab sensitivity,and potential downstream pathways,by using bioinformatics techniques,in vitro experiments and clinical cohort validation.Our results confirm that cetuximab resistance is correlated with metabolism.ACACB can lead to decreased sensitivity to cetuximab in CRC,and its mechanism may be related to EGFR phosphorylation,which could affect the activation of the mTOR/Akt signaling pathway and regulation of CDT1-,cyclin D1-,and p21-related cell cycle modulation. | Hi-Ju Hong Yanfei Shao Sen Zhang Guang Yang Hongtao Jia Xiao Yang Ling Huang Shuchun Li Batuer Aikemu Luyang Zhang Junjun Ma Lu Zang Jing Sun Minhua Zheng | 2022 | Acta Biochimica et Biophysica Sinica2022，54，11： | 1 |
| 5 | Generation of Monoclonal Antibodies against Non-structural Protein 3AB of Foot-and-Mouth Disease Virus显示文摘To identify linear epitopes on the non-structural protein 3AB of foot-and-mouth disease virus (FMDV), BABL/c mice were immunized with the 3AB protein and splenocytes of BALB/c mice were fused with myeloma Sp2/0 cells. Two hybridoma monoclonal antibodies (mAbs) cell lines against the 3AB protein of foot-and-mouth disease virus (FMDV) were obtained, named C6 and E7 respectively . The microneutralization titer was 1:1024 for mAb C6, and 1:512 for E7. Both mAbs contain kappa light chains, and were of subclass IgG2b. In order to define the mAbs binding epitopes, the reactivity of these mAbs against FMDV were examined by indirect ELISA. The results showed that both mAbs can react with FMDV, but had no cross-reactivity with Swine Vesicular Disease (SVD) antigens. The titers in abdomen liquor were 1:5×106 for C6 and 1:2×106 for E7. In conclusion, the mAbs obtained from this study are specific for the detection of FMDV, can be used for etiological and immunological researches on FMDV, and have potential use in diagnosis and future vaccine designs. | Tong Lin Junjun Shao Huiyun Chang Shandian Gao Guozheng Cong Junzheng Du | 2012 | Virologica Sinica2012，27，5： | 0 |
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