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| 1 | Prostate cancer identification: quantitative analysis of T2-weighted MR images based on a back propagation artificial neural network model显示文摘Computer-aided diagnosis(CAD) systems have been proposed to assist radiologists in making diagnostic decisions by providing helpful information. As one of the most important sequences in prostate magnetic resonance imaging(MRI), image features from T2-weighted images(T2WI) were extracted and evaluated for the diagnostic performances by using CAD. We extracted 12 quantitative image features from prostate T2-weighted MR images. The importance of each feature in cancer identification was compared in the peripheral zone(PZ) and central gland(CG), respectively. The performance of the computer-aided diagnosis system supported by an artificial neural network was tested. With computer-aided analysis of T2-weighted images, many characteristic features with different diagnostic capabilities can be extracted. We discovered most of the features(10/12) had significant difference(P<0.01) between PCa and non-PCa in the PZ, while only five features(sum average, minimum value, standard deviation, 10 th percentile, and entropy) had significant difference in CG. CAD prediction by features from T2 w images can reach high accuracy and specificity while maintaining acceptable sensitivity. The outcome is convictive and helpful in medical diagnosis. | ZHAO Kai WANG ChengYan HU Juan YANG XueDong WANG He LI FeiYu ZHANG XiaoDong ZHANG Jue WANG XiaoYing | 2015 | Science China(Life Sciences)2015，58，7： | 16 |
| 2 | Quantitative analysis of diffusion-weighted magnetic resonance images:differentiation between prostate cancer and normal tissue based on a computer-aided diagnosis system显示文摘Diffusion-weighted imaging(DWI) is considered to be one of the dominant modalities used in prostate cancer(PCa) detection and the assessment of lesion aggressiveness,especially for peripheral zone(PZ) PCa.Computer-aided diagnosis(CAD),which is capable of automatically extracting and evaluating image features,can integrate multiple parameters and improve the detection of PCa.In this study,13 quantitative image features were extracted from DWI by CAD,and diagnostic efficacy was analyzed in both the PZ and transition zone(TZ).The results demonstrated that there was a significant difference(P<0.05) between PCa and non-PCa for nine of the 13 features in the PZ and five of the 13 features in the TZ.Besides,the prediction outcome of CAD had a strong correlation with the DWI scores that were graded by experienced radiologists according to the Prostate Imaging-Reporting and Data System Version 2(PI-RADS v2). | Ge Gao Chengyan Wang Xiaodong Zhang Juan Hu Xuedong Yang He Wang Jue Zhang Xiaoying Wang | 2017 | Science China(Life Sciences)2017，60，1： | 13 |
| 3 | Initial analysis for characterizing and mitigating the pseudorange biases of BeiDou navigation satellite system显示文摘Pseudorange bias has become a practical obstacle in the field of high-precision global navigation satellite system(GNSS)applications,which greatly restricts the further development of high-precision applications.Unfortunately,no studies have been conducted on the pseudorange biases of the BeiDou navigation satellite system(BDS).To mitigate the effects of pseudorange biases on the BDS performance to the greatest extent possible,the origin of such BDS pseudorange biases are first thoroughly illustrated,based upon which the dependency of the biases on the receiver configurations are studied in detail.Owing to the limitations regarding the parameter re-settings for hardware receivers,software receiver technology was used to achieve the ergodicity of the receiver parameters,such as the correlator spacing and front-end bandwidth,using high-fidelity signal observations collected by a 40-m-high gain dish antenna at Haoping Observatory.Based on this,the pseudorange biases of the BDS B1I and B3I signals and their dependency on different correlator spacings and front-end bandwidths were adequately provided.Finally,herein,the suggested settings of the correlator spacing and front-end bandwidth for BDS receivers are in detail proposed for the first time.As a result,the pseudorange biases of the BDS signals will be less than 20 cm,reaching even under 10 cm,under this condition.This study will provide special attention to GNSS pseudorange biases,and will significantly promote a clear definition of the appropriate receiver parameter settings in the interface control documents of BDS and other individual satellite systems. | Chengyan He Xiaochun Lu Ji Guo Chengeng Su Wei Wang Meng Wang | 2020 | Satellite Navigation2020，1，1： | 7 |
| 4 | High-density genetic map construction and identification of loci controlling flower-type traits in Chrysanthemum(Chrysanthemum×morifolium Ramat.)显示文摘Flower type is an important and extremely complicated trait of chrysanthemum.The corolla tube merged degree(CTMD)and the relative number of ray florets(RNRF)are the two key factors affecting chrysanthemum flower type.However,few reports have clarified the inheritance of these two complex traits,which limits directed breeding for flower-type improvement.In this study,305 F1 hybrids were obtained from two parents with obvious differences in CTMD and RNRF performance.Using specific-locus amplified fragment sequencing(SLAF-seq)technology,we constructed a high-density genetic linkage map with an average map distance of 0.76 cM.Three major QTLs controlling CTMD and four major QTLs underlying RNRF were repeatedly detected in the 2 years.Moreover,the synteny between the genetic map and other Compositae species was investigated,and weak collinearity was observed.In QTL regions with a high degree of genomic collinearity,eight annotated genes were probed in the Helianthus annuus L.and Lactuca sativa L.var.ramosa Hort.genomes.Furthermore,20 and 11 unigenes were identified via BLAST searches between the SNP markers of the QTL regions and the C.vestitum and C.lavandulifolium transcriptomes,respectively.These results lay a foundation for molecular marker-assisted breeding and candidate gene exploration in chrysanthemum without a reference assembly. | Xuebin Song Yuhui Xu Kang Gao Guangxun Fan Fan Zhang Chengyan Deng Silan Dai He Huang Huaigen Xin Yingying Li | 2020 | Horticulture Research2020，7，1： | 5 |
| 5 | Development of BCPDA-Eu^3+-BAS Labeled Hepatitis B Surface Antibodies显示文摘 | TAN Wenjia SUN Zhixia XUAN Lili LI Junling XIE Wenbing HE Chengyan PAN Lihua | 2018 | Chemical Research in Chinese Universities2018，34，1： | 4 |
| 6 | Multifunctional Fibroblasts Enhanced via Thermal and Freeze-Drying Post-treatments of Aligned Electrospun Nanofiber Membranes显示文摘Parallel fibrous scaffolds play a critical role in controlling the morphology of cells to be more natural and biologically inspired.Among popular tissue engineering materials,poly(2-hydroxyethyl methacrylate)(pHEMA)has been widely investigated in conventional forms due to its biocompatibility,low toxicity,and hydrophilicity.However,the swelling of pHEMA in water remains a major concern.To address this issue,randomly oriented and aligned as-spun pHEMA nanofibrous scaffolds were first fabricated at speeds of 300 and 2000 rpm in this study,which were then post-treated using either a thermal or a freeze-drying method.In cell assays,human dermal fibroblasts(HDFs)adhered to the freeze-drying treated substrates at a significantly faster rate,whereas they had a higher cell growth rate on thermally-treated substrates.Results indicated that the structural properties of pHEMA nanofibrous scaffolds and subsequent cellular behaviors were largely dependent on post-treatment methods.Moreover,this study suggests that aligned pHEMA nanofibrous substrates tended to induce regular fibroblast orientation and unidirectionally oriented actin cytoskeletons over random pHEMA nanofibrous substrates.Such information has predictive power and provides insights into promising post-treatment methods for improving the properties of aligned pHEMA scaffolds for numerous tissue engineering applications. | Ya Li Qian Shen Jing Shen Xinbo Ding Tao Liu Jihuan He Chengyan Zhu Ding Zhao Jiadeng Zhu | 2021 | Advanced Fiber Materials2021，3，1： | 2 |
| 7 | Recommendation for Cardiac Magnetic Resonance Imaging-Based Phenotypic Study:Imaging Part显示文摘Cardiac magnetic resonance(CMR)imaging provides important biomarkers for the early diagnosis of many cardiovascular diseases and has been reported to reveal phenome-wide associations of cardiac/aortic structure and functionality in popula-tion studies.Nevertheless,due to the complexity of operation and variations among manufactural vendors,magnetic field strengths,coils,sequences,scan parameters,and image analysis approaches,CMR is rarely used in large cohort studies.Existing guidelines mainly focused on the diagnosis of cardiovascular diseases,which did not aim to basic research.The purpose of this study was to propose a recommendation for CMR based phenotype measurements for cohort study.We classify the imaging sequences of CMR into three categories according to the importance and universality of correspond-ing measurable phenotypes.The acquisition time and repeatability of the phenotypic measurement were also taken into consideration during the categorization.Unlike other guidelines,this recommendation focused on quantitative measurement of large amount of phenotypes from CMR. | Chengyan Wang Yan Li Jun Lv Jianhua Jin Xumei Hu Xutong Kuang Weibo Chen He Wang | 2021 | Phenomics2021，1，4： | 1 |
| 8 | Measurement of Cerebral Oxygen Extraction Fraction Using Quantitative BOLD Approach:A Review显示文摘Quantification of brain oxygenation and metabolism,both of which are indicators of the level of brain activity,plays a vital role in understanding the cerebral perfusion and the pathophysiology of brain disorders.Magnetic resonance imaging(MRI),a widely used clinical imaging technique,which is very sensitive to magnetic susceptibility,has the possibility of substitut-ing positron emission tomography(PET)in measuring oxygen metabolism.This review mainly focuses on the quantitative blood oxygenation level-dependent(qBOLD)method for the evaluation of oxygen extraction fraction(OEF)in the brain.Here,we review the theoretic basis of qBOLD,as well as existing acquisition and quantification methods.Some published clinical studies are also presented,and the pros and cons of qBOLD method are discussed as well. | Hongwei Li Chengyan Wang Xuchen Yu Yu Luo He Wang | 2023 | Phenomics2023，3，1： | 1 |
| 9 | Tobacco Rattle Virus-induced Phytoene Desaturase (PDS) Silencing in Centaurea cyanus显示文摘Virus-induced gene silencing(VIGS)is a genetic tool used to assess gene function.Tobacco rattle virus(TRV)is a VIGS vector commonly used to induce endogenous gene silencing in plants.However,there is no VIGS system established for Centaurea spp.We evaluated the effectiveness of a TRV-based VIGS system using phytoene desaturase(PDS)as a reporter gene in Centaurea cyanus.Three methods including pressure-,vacuum-and apical meristem-infiltrationwere tested to infect C.cyanus seedlings.Photobleached leaveswere only obtained using apicalmeristem-infiltration after a 14 d treatment.The CcPDS transcripts in photobleached leaves were significantly reduced compared with that in green leaves treated with empty TRV.Four C.cyanus cultivars were tested to detect their VIGS responses,and‘Dwarf Tom Pouce Blue’was the most sensitive.The agro-infiltration condition was optimized by screening for the optimal seedling stage as well as the optimum Agrobacterium density for efficient silencing.Seedlings with four true leaves and infiltration with an Agrobacterium density of OD_(600)0.5 were optimal conditions to obtain more photobleached leaves and more intense photobleached phenotype.The results demonstrated the feasibility of TRV-based VIGS for functional analysis of genes in C.cyanus. | Chengyan Deng Fan Zhang Jiaying Wang Yanfei Li He Huang Silan Dai | 2021 | Horticultural Plant Journal2021，7，2： | 1 |
| 10 | Profiling of Ubiquitination Modification Sites in Talin in Colorectal Carcinoma by Mass Spectrometry显示文摘Talin protein was partially purified from human colorectal carcinoma tissues, which was subject to tryptic digestion. Immunoaffinity precipitation with specific antibodies that recognize diglycyl-lysine(Lys) remnants from tryptic digestion of ubiquitinated peptides was used to enrich ubiquitinated sites in talin. Mass spectrometry coupled with capillary reverse-phase high-performance liquid chromatography was used to analyze tlie enriched peptides. Specifically, four peptides containing diglycyl-Lys remnants from talin, namely, TAK(ub)VLVEDTK, QQQYK(ub) FLPSELRDEH, K(ub)STVLQQQYNR, and EGILK(ub)TAK can be determined using mass spectrometric data. This study provides an analytical method for further study in tlie relationship between ubiquitination modification of talin and its biological activity in colorectal cancer tissues with different pathological processes. | WANG Ke QIAO Lu LI Xiaoou LI Shimeng WANG Yimin XU Xuesong HE Chengyan FANG Ling | 2019 | Chemical Research in Chinese Universities2019，35，3： | 0 |
| 11 | Proteomics Analysis of Up-regulated NPM1 Protein in Colorectal Cancer显示文摘 | WANG Hai HE Chengyan YANG Zhaowei GAO Shen LI Lingxia SUN Xiaoying FANG Ling LIU Ning LI Hongjun | 2016 | Chemical Research in Chinese Universities2016，32，3： | 0 |
| 12 | Protocol for Brain Magnetic Resonance Imaging and Extraction of Imaging‑Derived Phenotypes from the China Phenobank Project显示文摘Imaging-derived phenotypes(IDPs)have been increasingly used in population-based cohort studies in recent years.As widely reported,magnetic resonance imaging(MRI)is an important imaging modality for assessing the anatomical structure and function of the brain with high resolution and excellent soft-tissue contrast.The purpose of this article was to describe the imaging protocol of the brain MRI in the China Phenobank Project(CHPP).Each participant underwent a 30-min brain MRI scan as part of a 2-h whole-body imaging protocol in CHPP.The brain imaging sequences included T1-magnetization that prepared rapid gradient echo,T2 fuid-attenuated inversion-recovery,magnetic resonance angiography,difusion MRI,and resting-state functional MRI.The detailed descriptions of image acquisition,interpretation,and post-processing were provided in this article.The measured IDPs included volumes of brain subregions,cerebral vessel geometrical parameters,microstructural tracts,and function connectivity metrics. | Chengyan Wang Zhang Shi Yan Li Xueqin Xia Xutong Kuang Shufang Qian Le Xue Lizhen Lan Yudan Wu Na Zhang Ji Tao Xumei Hu Wenzhao Cao Naying He Yike Guo Weibo Chen Jun Zhang Jingchun Luo He Wang Mei Tian | 2023 | Phenomics2023，3，6： | 0 |
| 13 | An anti-image interference quadrature IF architecture for satellite receivers显示文摘Since Global Navigation Satellite System(GNSS) signals span a wide range of frequency, wireless signals coming from other communication systems may be aliased and appear as image interference. In quadrature intermediate frequency(IF) receivers, image aliasing due to in-phase and quadrature(I/Q) channel mismatches is always a big problem. I/Q mismatches occur because of gain and phase imbalances between quadrature mixers and capacitor mismatches in analog-to-digital converters(ADC). As a result, the dynamic range and performance of a receiver are severely degraded. In this paper, several popular receiver architectures are summarized and the image aliasing problem is investigated in detail. Based on this analysis, a low-IF architecture is proposed for a single-chip solution and a novel and feasible anti-image algorithm is investigated. With this anti-image digital processing, the image reject ratio(IRR) can reach approximately above50 dB, which relaxes image rejection specific in front-end circuit designs and allows cheap and highly flexible analog front-end solutions. Simulation and experimental data show that the antiimage algorithm can work effectively, robustly, and steadily. | He Weidong Lu Xiaochun He Chengyan James Torley | 2014 | Chinese Journal of Aeronautics2014，27，4： | 0 |
| 14 | 建立具有体内胚内和胚外发育潜能的多能干细胞显示文摘文章简介在已知的体外培养的干细胞类型当中,多能干细胞具有最高的发育潜能,能够形成构成成年个体的所有细胞类型。但是,多能干细胞很难在体内发育过程中形成胚外的胎盘组织。 | Yang Yang Bei Liu Jun Xu Jinlin Wang Jun Wu Cheng Shi Yaxing Xu Jiebin Dong Chengyan Wang Weifeng Lai Jialiang Zhu Liang Xiong Dicong Zhu Xiang Li Weifeng Yang Takayoshi Yamauchi Atsushi Sugawara Zhongwei Li Fangyuan Sun Xiangyun Li Chen Li Aibin He Yaqin Du Ting Wang Chaoran Zhao Haibo Li Xiaochun Chi Hongquan Zhang Yifang Liu Cheng Li Shuguang Duo Ming Yin 沈浣 Juan Carlos Izpisua Belmonte 邓宏魁 | 2018 | 科学新闻2018，0，4： | 0 |
| 15 | Few-layer WSe2 lateral homo-and hetero-junctions with superior optoelectronic performance by laser manufacturing显示文摘Lateral hetero-junctions are considered as potential candidate for building blocks in modern electronics and optoelectronics,however,the construction of which remains a challenge.In this work,by using a laser-assisted manufacture technique,WSe2/WO3-x hetero-junction and monolayer/trilayer WSe2 homo-junction with Schottky diode like behavior are fabricated,both of which present competitive performance for photodetection and power generation in a wide range of wavelengths from ultraviolet to infrared,with maximum photoresponsivity of 10 A/W,external quantum efficiency of 14%,and power conversion efficiency of 1.3%.Combined with Kelvin probe microscopy and electrical transport measurements,it is demonstrated that the barrier-induced built-in electric field at WSe2/WO3-x interface,and the energy band discontinuities at the monolayer/trilayer WSe2 interface facilitate the separation of photo-generated electron-hole pairs.Our work provides a solid step towards the controllable construction of lateral junctions by laser-assisted manufacture for exploiting van der Waals materials-based novel electronic and optoelectronic applications. | LI Yang YANG Jian ZHAN ZhaoYao WU Jumiati LI Hai ZHEN Liang HE QiYuan XU ChengYan | 2020 | Science China(Technological Sciences)2020，63，8： | 0 |
| 16 | Mass Spectrometric Analysis Revealing Phosphorylation Modifications of Periostin显示文摘 | ZHAO Yueming SONG Lina LI Lingxia LI Xiao'ou SHI Qinghong HONG Xin GUO Jia FANG Ling HE Chengyan LI Hongjun ZHAO Haifeng | 2015 | Chemical Research in Chinese Universities2015，31，1： | 0 |
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