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| 1 | Improved Brassica rapa reference genome by single-molecule sequencing and chromosome conformation capture technologies显示文摘Brassica rapa comprises several important cultivated vegetables and oil crops.Current reference genome assemblies of Brassica rapa are quite fragmented and not highly contiguous,thereby limiting extensive genetic and genomic analyses.Here,we report an improved assembly of the B.rapa genome(v3.0)using single-molecule sequencing,optical mapping,and chromosome conformation capture technologies(Hi-C).Relative to the previous reference genomes,our assembly features a contig N50 size of 1.45 Mb,representing a~30-fold improvement.We also identified a new event that occurred in the B.rapa genome~1.2 million years ago,when a long terminal repeat retrotransposon(LTR-RT)expanded.Further analysis refined the relationship of genome blocks and accurately located the centromeres in the B.rapa genome.The B.rapa genome v3.0 will serve as an important community resource for future genetic and genomic studies in B.rapa.This resource will facilitate breeding efforts in B.rapa,as well as comparative genomic analysis with other Brassica species. | Lei Zhang Xu Cai Jian Wu Min Liu Stefan Grob Feng Cheng Jianli Liang Chengcheng Cai Zhiyuan Liu Bo Liu Fan Wang Song Li Fuyan Liu Xuming Li Lin Cheng Wencai Yang Mai-he Li Ueli Grossniklaus Hongkun Zheng Xiaowu Wang | 2018 | Horticulture Research2018，5，1： | 10 |
| 2 | Joint utilization of genetic analysis and semi-cloning technology reveals a digenic etiology of Müllerian anomalies显示文摘Dear Editor,Identifying pathogenic gene mutations and their combination is critical but challenging in dissecting the etiology of complex diseases when more than one gene is involved.1 The digenic/oligogenic/omnigenic models,holding that more than one gene could act synergistically,appeal to a wide range of genes responsible for complex phenotypes.1,2,3,4 These genetic models advanced our understanding of genetic factors underlying complex phenotypes,yet an accordingly rapid and efficient experimental assay for identifying pathogenic combinations of genetic variants at animal model level is lacking and urgently needed. | Lingbo Wang Ying Zhang Xiaoyi Fu Shuangshuang Dong Shuyan Tang Ning Zhang Chengcheng Song Nan Yang Lin Zhang Hongyan Wang Huijuan Shi Li Jin Feng Zhang Jinsong Li Keqin Hua | 2020 | Cell Research2020，30，1： | 8 |
| 3 | Whole-genome sequencing provides insights into the genetic diversity and domestication of bitter gourd(Momordica spp.)显示文摘Bitter gourd(Momordica charantia)is a popular cultivated vegetable in Asian and African countries.To reveal the characteristics of the genomic structure,evolutionary trajectory,and genetic basis underlying the domestication of bitter gourd,we performed whole-genome sequencing of the cultivar Dali-11 and the wild small-fruited line TR and resequencing of 187 bitter gourd germplasms from 16 countries.The major gene clusters(Bi clusters)for the biosynthesis of cucurbitane triterpenoids,which confer a bitter taste,are highly conserved in cucumber,melon,and watermelon.Comparative analysis among cucurbit genomes revealed that the Bi cluster involved in cucurbitane triterpenoid biosynthesis is absent in bitter gourd.Phylogenetic analysis revealed that the TR group,including 21 bitter gourd germplasms,may belong to a new species or subspecies independent from M.charantia.Furthermore,we found that the remaining 166 M.charantia germplasms are geographically differentiated,and we identified 710,412,and 290 candidate domestication genes in the South Asia,Southeast Asia,and China populations,respectively.This study provides new insights into bitter gourd genetic diversity and domestication and will facilitate the future genomics-enabled improvement of bitter gourd. | Junjie Cui Yan Yang Shaobo Luo Le Wang Rukui Huang Qingfang Wen Xiaoxia Han Nansheng Miao Jiaowen Cheng Ziji Liu Changyuan Zhang Chengcheng Feng Haisheng Zhu Jianwen Su Xinjian Wan Fang Hu Yu Niu Xiaoming Zheng Yulan Yang Dai Shan Zhensheng Dong Weiming He Narinder P.S.Dhillon Kailin Hu | 2020 | Horticulture Research2020，7，1： | 7 |
| 4 | Brassica rapa Genome 2.0: A Reference Upgrade through Sequence Re-assembly and Gene Re-annotation显示文摘 | Chengcheng Cai Xiaobo Wang Bo Liu Jian Wu Jianli Liang Yinan Cui Feng Cheng Xiaowu Wang | 2017 | Molecular Plant2017，10，4： | 6 |
| 5 | Concrete durability under different circumstances based on multi-factor effects显示文摘Concrete durability has become a hot research field in civil engineering. Concrete structures suffer salt-erosion damage to different degrees in the semi-arid region of North China. The environmental condition is one of the important factors affecting the durability of concrete constructions. To realize fully the interaction between various environmental factors, this paper researched concrete durability in the salt environment under combined actions(immersing, freeze–thaw cycles, and wet–dry cycles). According to the laboratory test data, the concrete-durability degradation law under coupling-effect factors was investigated. The results show that concrete's compressive strength decreases with the increase of salt concentration and immersion time. No matter what the environmental conditions were, the compressive strength-loss ratio increased with the test time. The compressive strength-test results indicate that sodium sulfate has the strongest corrosive effect on concrete durability, followed by calcium chloride, with sodium chloride having the weakest corrosion. Compared with the other two environmental factors, the wet–dry cycle is the key factor affecting concrete durability. Therefore, in engineering practice, the influence of environment conditions on the strength and durability of concrete should be taken into full consideration, especially in the wet–dry environment with salt conditions. | Feng Ming ChengCheng Du YuHang Liu XiangYang Shi DongQing Li | 2017 | Research in Cold and Arid Regions2017，9，4： | 6 |
| 6 | Detection of radio-frequency interference signals from AMSR-E data over the United States with snow cover显示文摘收音机频率干扰(射频干扰) 引起严重污染到察觉到观察和相应检索产品的被动、活跃的微波。射频干扰信号应该在把微波数据用于检索和数据吸收前被检测并且过滤。在因为雪表面的散布效果,雪盖住的陆地表面上检测射频干扰是困难的。双主要部件分析(DPCA ) 方法在这研究被采用,并且它在识别射频干扰的能力在雪上在 AMSR-E 数据发信号盖住的区域被调查。结果证明尽管有散布的雪的影响, DPCA 方法能有效地检测射频干扰信号,并且检测射频干扰发信号坚持随着时间的过去。比作另外的方法,例如 PCA 并且使 PCA 正常化, DPCA 为运作的申请更柔韧、合适。 | Chengcheng FENG Xiaolei ZOU Juan ZHAO | 2016 | Frontiers of Earth Science2016，10，2： | 5 |
| 7 | EEG processing and its application in brain-computer interface显示文摘Electroencephalogram (EEG) is an efficient tool in exploring human brains. It plays a very important role in diagnosis of disorders related to epilepsy and development of new interaction techniques between machines and human beings,namely,brain-computer interface (BCI). The purpose of this review is to illustrate the recent researches in EEG processing and EEG-based BCI. First,we outline several methods in removing artifacts from EEGs,and classical algorithms for fatigue detection are discussed. Then,two BCI paradigms including motor imagery and steady-state motion visual evoked potentials (SSMVEP) produced by oscillating Newton's rings are introduced. Finally,BCI systems including wheelchair controlling and electronic car navigation are elaborated. As a new technique to control equipments,BCI has promising potential in rehabilitation of disorders in central nervous system,such as stroke and spinal cord injury,treatment of attention deficit hyperactivity disorder (ADHD) in children and development of novel games such as brain-controlled auto racings. | Wang Jing Xu Guanghua Xie Jun Zhang Feng Li Lili Han Chengcheng Li Yeping Sun Jingjing | 2013 | Engineering Sciences2013，11，1： | 3 |
| 8 | An Ultrasonic Backscatter Instrument for Cancellous Bone Evaluation in Neonates显示文摘Ultrasonic backscatter technique has shown promise as a noninvasive cancellous bone assessment tool. A novel ultrasonic backscatter bone diagnostic(UBBD) instrument and an in vivo application for neonatal bone evaluation are introduced in this study. The UBBD provides several advantages, including noninvasiveness, nonionizing radiation, portability, and simplicity. In this study, the backscatter signal could be measured within 5 s using the UBBD. Ultrasonic backscatter measurements were performed on 467 neonates(268 males and 199 females) at the left calcaneus. The backscatter signal was measured at a central frequency of 3.5 MHz. The delay(T_1) and duration(T_2) of the backscatter signal of interest(SOI) were varied, and the apparent integrated backscatter(AIB), frequency slope of apparent backscatter(FSAB), zero frequency intercept of apparent backscatter(FIAB), and spectral centroid shift(SCS) were calculated. The results showed that the SOI selection had a direct influence on cancellous bone evaluation. The AIB and FIAB were positively correlated with the gestational age(|R| up to 0.45, P < 0.001) when T_1 was short(< 8 μs), while negative correlations(|R| up to 0.56, P < 0.001) were commonly observed for T_1 > 10 μs. Moderate positive correlations(|R| up to 0.45, P < 0.001) were observed for FSAB and SCS with gestational age when T_1 was long(> 10 μs). The T_2 mainly introduced fluctuations in the observed correlation coefflcients. The moderate correlations observed with UBBD demonstrate the feasibility of using the backscatter signal to evaluate neonatal bone status. This study also proposes an explicit standard for in vivo SOI selection and neonatal cancellous bone assessment. | Chengcheng Liu Rong Zhang Ying Li Feng Xu Dean Ta Weiqi Wang | 2015 | Engineering2015，1，3： | 2 |
| 9 | Flower-like CuO hierarchical nanostructures: synthesis, characterization, and property显示文摘基于 Nanoflake 的象花的 CuO nanostructures 通过热分解被综合了[Cu (NH3 ) 4 ] 没有在低温度的任何表面活化剂和催化剂的 2+ 答案。产品被 X 光检查衍射(XRD ) 和地排放扫描电子显微镜学(FESEM ) 描绘。可能的形成过程基于聚集再结晶机制被建议。最后,获得的象花的 CuO 层次 nanostructures 在实验被用作光催化剂。这被发现 asprepared 玫瑰精 B 的 photocatalytic 分解上的象花的 CuO 层次 nanostructures 展览上级 photocatalytic 性质由于他们的层次结构。 | Jiarui HUANG Feng TANG Cuiping GU Chengcheng SHI Muheng ZHAI | 2012 | Frontiers of Optoelectronics2012，5，4： | 2 |
| 10 | The spectrum entropy estimation method for ultrasonic backscattering signal in cancellous bones显示文摘In the application of cancellous bone ultrasound diagnosis based on backscattering method,it is of great importance to estimate fast and accurately whether the valid backscattering signal exists in the received signal.We propose a fast estimation method based on spectrum entropy method.With 984 records of adult calcaneus clinical data,we estimate the validity of the backscatter signal using this method.The results of the proposed method and the results of experience-base judgement were compared and analyzed.And two key parameters,the signal range length and the segment number of the spectrum entropy,were analyzed.The results show when the signal range length is 13 us and the segment number is 15-20,this method can get the best result(accuracy>95%,sensitivity>99%,specificity>87%),while taking little calculation time(1.5 ms).Therefore,this spectrum entropy method can satisfy the accuracy and real-time requirements in the ultrasonic estimation for cancellous bone. | XU Feng XU Yiwen LIU Chengcheng TA De'an GUO Jianzhong | 2017 | Chinese Journal of Acoustics2017，36，3： | 2 |
| 11 | Author Correction:Improved Brassica rapa reference genome by single-molecule sequencing and chromosome conformation capture technologies显示文摘Since the publication of this article,the authors have noticed that the total gene models(45,985),tandem arrays(2077),tandem genes(4963),redundancy removed(43,099),syntenic genes(39,858),nonsyntenic genes(3241),genes on chromosomes(45,411),genes on scaffolds(574)of B.rapa reference genome v3.0 were mistaken in the article. | Lei Zhang Xu Cai Jian Wu Min Liu Stefan Grob Feng Cheng Jianli Liang Chengcheng Cai Zhiyuan Liu Bo Liu Fan Wang Song Li Fuyan Liu Xuming Li Lin Cheng Wencai Yang Mai-he Li Ueli Grossniklaus Hongkun Zheng Xiaowu Wang | 2019 | Horticulture Research2019，6，1： | 2 |
| 12 | The Solar Upper Transition Region Imager(SUTRI)Onboard the SATech-01 Satellite显示文摘The Solar Upper Transition Region Imager(SUTRI)onboard the Space Advanced Technology demonstration satellite(SATech-01),which was launched to a Sun-synchronous orbit at a height of~500 km in 2022 July,aims to test the on-orbit performance of our newly developed Sc/Si multi-layer reflecting mirror and the 2k×2k EUV CMOS imaging camera and to take full-disk solar images at the Ne VII 46.5 nm spectral line with a filter width of~3 nm.SUTRI employs a Ritchey-Chrétien optical system with an aperture of 18 cm.The on-orbit observations show that SUTRI images have a field of view of~416×416 and a moderate spatial resolution of~8″without an image stabilization system.The normal cadence of SUTRI images is 30 s and the solar observation time is about16 hr each day because the earth eclipse time accounts for about 1/3 of SATech-01's orbit period.Approximately15 GB data is acquired each day and made available online after processing.SUTRI images are valuable as the Ne VII 46.5 nm line is formed at a temperature regime of~0.5 MK in the solar atmosphere,which has rarely been sampled by existing solar imagers.SUTRI observations will establish connections between structures in the lower solar atmosphere and corona,and advance our understanding of various types of solar activity such as flares,filament eruptions,coronal jets and coronal mass ejections. | Xianyong Bai Hui Tian Yuanyong Deng Zhanshan Wang Jianfeng Yang Xiaofeng Zhang Yonghe Zhang Runze Qi Nange Wang Yang Gao Jun Yu Chunling He Zhengxiang Shen Lun Shen Song Guo Zhenyong Hou Kaifan Ji Xingzi Bi Wei Duan Xiao Yang Jiaben Lin Ziyao Hu Qian Song Zihao Yang Yajie Chen Weidong Qiao Wei Ge Fu Li Lei Jin Jiawei He Xiaobo Chen Xiaocheng Zhu Junwang He Qi Shi Liu Liu Jinsong Li Dongxiao Xu Rui Liu Taijie Li Zhenggong Feng Yamin Wang Chengcheng Fan Shuo Liu Sifan Guo Zheng Sun Yuchuan Wu Haiyu Li Qi Yang Yuyang Ye Weichen Gu Jiali Wu Zhe Zhang Yue Yu Zeyi Ye Pengfeng Sheng Yifan Wang Wenbin Li Qiushi Huang Zhong Zhang | 2023 | Research in Astronomy and Astrophysics2023，23，6： | 1 |
| 13 | Isolation and Identification of an Exopolysaccharide‐Producing Lactic Acid Bacterium Strain from Chinese Paocai and Biosorption of Pb(II) by Its Exopolysaccharide显示文摘 | Meiqin Feng Xiaohong Chen Chengcheng Li Rahman Nurgul Mingsheng Dong | 2012 | Journal of Food Science2012，，6： | 1 |
| 14 | Isolation and identification of an exopolysaccharide-producing lactic acid bacterium strain from Chinese paocai and biosorption of Pb(II) by its exopolysaccharide显示文摘 | Feng Meiqin Chen Xiaohong Li Chengcheng | 2012 | Journal of Food Science2012，77，6： | 1 |
| 15 | Enhancement of nose-to-brain delivery of basic fibroblast growth factor for improving rat memory impairments induced by co-injection of 13-amyloid and ibotenic acid into the bilateral hippocampus 显示文摘 | Chengcheng Feng Chi Zhang Xiayan Shao | 2012 | Int J Pharm2012，423，2： | 1 |
| 16 | Represen- tations for the Drazin inverses of the sum of two matrices and some block matrices 显示文摘 | BU Changjiang FENG Chengcheng BAI Shuyan | 2012 | Applied Mathematics and Compu- tation2012，218，10： | 1 |
| 17 | Association of low cadmium and mercury exposure with chronic kidney disease among Chinese adults aged≥80 years:A cross-sectional study显示文摘Background:The heavy metals cadmium(Cd)and mercury(Hg)are known to be widespread environmental contaminants and high occupational exposure adversely affects the risk of chronic kidney disease(CKD).However,evidence from epidemiological studies linking low Cd and Hg exposure(or non-industrial)to the risk of progression to CKD are conflicting.This study aimed to explore the association of low Cd and Hg exposure with the risk of CKD in Chinese adults aged≥80 years.Methods:The participants were recruited for the Healthy Aging and Biomarkers Cohort Study in 2017,an ongoing perspective survey conducted in longevity areas in China initially involving 3016 older adults.We used logistic regression models to estimate odds ratios(ORs)with 95%confidence intervals of CKD setting Cd and Hg as categorical variables.Logistic regression with restricted cubic spline was used to characterize a dose-response relationships between Cd or Hg concentrations and the risk of CKD in the study population.Results:The ORs for the risk of CKD comparing the fourth to the first quartile of blood Cd,blood Hg,urine Cd,and urine Hg were 1.77,1.57,2.03,and 1.50,respectively.Restricted cubic spline models showed that blood Cd and urine Hg were significantly linearly correlated with the risk of CKD,while blood Hg and urine Cd were non-linearly correlated with the risk of CKD with a steeper slope at concentrations<2.30μg/L and 3.30μg/g creatinine.Conclusions:Our findings suggest that even low Cd and Hg exposure(or non-industrial)were associated with increased risk of CKD in Chinese oldest old,although we did not find a significant multiplicative and additive interaction between Cd and Hg levels in relation to the risk of CKD. | Yuan Wei Yuebin Lyu Zhaojin Cao Feng Zhao Yingchun Liu Chen Chen Chengcheng Li Heng Gu Feng Lu Jinhui Zhou Bing Wu Yang Liu Juan Li Xiaoming Shi | 2022 | Chinese Medical Journal2022，135，24： | 1 |
| 18 | Wave propagation characteristics in frozen saturated soil显示文摘Ultrasonic detection technology is of great significance in the detection and evaluation of physical and mechanical properties of frozen soil, but wave propagation characteristics in frozen soil are unclear. Based on the three-phase composition of frozen saturated soil and the mixture theory, considering Bishop's effective stress formula, the wave propagation equations are establish for frozen saturated soil. In wave propagation, an entropy inequality was introduced to describe the coupling of different phases. The analytic expressions of propagation velocity and attenuation law of waves in frozen soil are obtained, and wave propagation characteristics in frozen saturated soil are discussed. Results show that four types of waves(i.e., P1, P2, P3 and S) are found in frozen saturated soil and all four wave types are dissipative waves, in which the attenuation of P3 is the maximum. The velocity of four waves increases sharply at the excitation frequency range of 10~3–10~9 Hz,but the wave velocity at high-frequency and low-frequency is almost constant. When volume ice content increases, the wave propagation velocity of P1 and S decreases dramatically, and the velocity of P2 increases gradually, but P3 velocity increases first and then decreases to zero with increasing saturation. The attenuation coefficients of P1 and S waves begins to increase gradually when the volume ice content is about 0.4, P2 increases first and then decreases with an increase of volume ice content and P3 increases with the volume ice content and decreases rapidly from extreme to zero. | ChengCheng Du DongQing Li Feng Ming YuHang Liu XiangYang Shi | 2018 | Research in Cold and Arid Regions2018，10，2： | 0 |
| 19 | Permeability evolution and gas flow in wet coal under non-equilibrium state:Considering both water swelling and process-based gas swelling显示文摘Accurate knowledge of gas flow within the reservoir and related controlling factors will be important for enhancing the production of coal bed methane.At present,most studies focused on the permeability evolution of dry coal under gas adsorption equilibrium,gas flow and gas diffusion within wet coal under the generally non-equilibrium state are often ignored in the process of gas recovery.In this study,an improved apparent permeability model is proposed which accommodates the water and gas adsorption,stress dependence,water film thickness and gas flow regimes.In the process of modeling,the water adsorption is only affected by water content while the gas adsorption is time and water content dependent;based on poroelastic mechanics,the effective fracture aperture and effective pore radius are derived;and then the variation in water film thickness for different pore types under the effect of water content,stress and adsorption swelling are modeled;the flow regimes are considered based on Beskok’s model.Further,after validation with experimental data,the proposed model was applied to numerical simulations to investigate the evolution of permeability-related factors under the effect of different water contents.The gas flow in wet coal under the non-equilibrium state is explicitly revealed. | Zhiyong Xiao Gang Wang Changsheng Wang Yujing Jiang Feng Jiang Chengcheng Zheng | 2023 | International Journal of Mining Science and Technology2023，33，5： | 0 |
| 20 | Adaptability Evaluation and Annual Production Model of Chinese Vegetable Varieties in Burundi显示文摘Burundi is one of the least developed countries identified by the United Nations.Vegetable is the main crop in Burundi,but the variety is relatively simple and the planting level is low.Making use of the rich vegetable varieties and advanced cultivation techniques in China,the adaptability evaluation of new vegetable varieties in China was jointly carried out in Burundi to screen the vegetable varieties suitable for local cultivation.The purpose of this paper is to study the integration of high-yield cultivation techniques and annual production model to improve the level of vegetable cultivation in Burundi.From 2009 to 2015,our unit,together with the Burundian Fruit and Vegetable Promotion Center,carried out screening experiments on 144 vegetable varieties,such as tomato,balsam pear,chieh-qua,wax gourd,and cabbage.Through the methods of preliminary screening and experimental screening,the vegetable varieties suitable for planting in Burundi were selected,and the cultivation techniques of some main vegetable varieties were studied.The demonstration new varieties and new techniques were integrated to verify the high-yield cultivation techniques in the field.In 2009,18 varieties suitable for local planting were selected from 96 vegetable varieties.In 2010,40 vegetable varieties were selected for screening test,and 9 varieties suitable for planting in Burundi were selected.In 2011,27 vegetable varieties selected in 2009 and 2010 were further evaluated for adaptability,and 13 vegetable varieties with high yield,strong resistance and good marketability were selected.Among them,there were 5 melon vegetables,3 solanaceous fruit vegetables,1 legume vegetables and 4 leafy vegetables.The cultivation techniques of some vegetable varieties were studied from 2011 to 2012,and the key points of cultivation techniques of chieh-qua and other vegetable varieties were clarified.According to the ecological characteristics of two main vegetable producing areas(the plateau and plain areas of Burundi),six sets of annual production and cropping arrangement plans covering melons,leafy vegetables,solanaceous fruits,beans and other vegetables were put forward,and the annual production model of multiple cropping and three-dimensional cultivation was integrated.From 2014 to 2015,according to the previous test results and market demand,8 vegetable varieties were selected for Burundi to carry out screening experiments.4 varieties with good yield and adaptability were selected for two consecutive years in 2014 and 2015.The integrated demonstration and effect verification of some selected vegetable varieties and cultivation techniques were carried out from 2015 to 2016,and the comprehensive advantages such as field yield and economic benefit were obvious.In this study,the adaptability of Chinese vegetable varieties in Burundi was evaluated,and 17 vegetable varieties suitable for local production were selected,including 5 melon vegetables,5 solanaceous fruit vegetables,1 legume vegetables and 6 leafy vegetables.This paper studies the integrated cultivation techniques and annual production model with obvious advantages in yield and benefit,which plays an important role in improving the planting level and benefit of vegetables in Burundi. | Kaiqiang LIU Chengcheng FENG Jiazuo LIANG Yuyi HUANG Guoqing GAO Rukui HUANG | 2020 | Asian Agricultural Research2020，12，3： | 0 |
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