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| 1 | Prunus genetics and applications after de novo genome sequencing:achievements and prospects显示文摘Prior to the availability of whole-genome sequences,our understanding of the structural and functional aspects of Prunus tree genomes was limited mostly to molecular genetic mapping of important traits and development of EST resources.With public release of the peach genome and others that followed,significant advances in our knowledge of Prunus genomes and the genetic underpinnings of important traits ensued.In this review,we highlight key achievements in Prunus genetics and breeding driven by the availability of these whole-genome sequences.Within the structural and evolutionary contexts,we summarize:(1)the current status of Prunus whole-genome sequences;(2)preliminary and ongoing work on the sequence structure and diversity of the genomes;(3)the analyses of Prunus genome evolution driven by natural and man-made selection;and(4)provide insight into haploblocking genomes as a means to define genome-scale patterns of evolution that can be leveraged for trait selection in pedigree-based Prunus tree breeding programs worldwide.Functionally,we summarize recent and ongoing work that leverages whole-genome sequences to identify and characterize genes controlling 22 agronomically important Prunus traits.These include phenology,fruit quality,allergens,disease resistance,tree architecture,and self-incompatibility.Translationally,we explore the application of sequence-based marker-assisted breeding technologies and other sequence-guided biotechnological approaches for Prunus crop improvement.Finally,we present the current status of publically available Prunus genomics and genetics data housed mainly in the Genome Database for Rosaceae(GDR)and its updated functionalities for future bioinformatics-based Prunus genetics and genomics inquiry. | Maria JoséAranzana Véronique Decroocq Elisabeth Dirlewanger Iban Eduardo Zhong Shan Gao Ksenija Gasic Amy Iezzoni Sook Jung Cameron Peace Humberto Prieto Ryutaro Tao Ignazio Verde Albert G.Abbott Pere Arús | 2019 | Horticulture Research2019，6，1： | 8 |
| 2 | 普通杏和西伯利亚杏野生居群遗传多样性与其地理分布关系研究显示文摘地理距离可能有利于陆地植物种群的遗传分化,了解地理因素如何影响基因流和居群遗传结构,对于遗传多样性保护至关重要。本研究以桃李属(Prunus L.)2个自然分布的种,即欧亚大陆的西伯利亚杏(Prunus sibirica L.)和中亚地区的普通杏(Prunus armeniaca L.)共计16个野生居群为材料。本研究筛选多态性较好的18个微卫星DNA标记进行基因分型,应用贝叶斯模型分析其遗传多样性和居群遗传结构。本研究发现:(1)起源于中国华北和东北地区的西伯利亚杏野生居群的遗传变异和遗传多样性较中亚普通杏野生居群丰富,2个杏野生居群的遗传结构诠释了各自不同的最佳遗传群簇(K);(2)中国西伯利亚杏居群的遗传群簇分布具有地理差异特征,处于西北地区的居群呈现孤立结构,可能是与复杂的生态环境和地理上栖息自西向东的分布广泛有关;中亚地区野生普通杏居群的遗传结构呈高度杂合,可能由最近发生在有限地理分布区域中居群间的基因流引起;(3)地理隔离(IBD)解析了遗传分化与地理梯度之间的相关关系,表明中国西伯利亚杏野生居群的地理距离与遗传距离之间存在显著的相关性,而在中亚的普通杏野生居群中则不同。综上,本研究指出与生态地理模式相关的遗传结构可能会影响杏属植物的遗传分化和遗传多样性,但对遗传分化和多样性的影响程度在不同的杏种居群中有所不同。基于此,进一步讨论了开展遗传多样性保护的可能策略和意义。 | 刘硕 Decroocq Veronique 张玉军 刘宁 马小雪 章秋平 徐铭 张玉萍 刘威生 | 2020 | 植物遗传资源学报2020，21，6： | 6 |
| 3 | Development and transferability of apricot and grape EST microsatellite markers across taxa显示文摘 | Decroocq V Fave M G Hagen L | 2003 | Theor Appl Genet2003，106，5： | 1 |
| 4 | A TM3-1ike MADS-box gene from Eucalyptus expressed in both vegetative and reproductive tissues 显示文摘 | Decroocq V Zhu X Kauffman M | 1999 | Gene1999，228，： | 1 |
| 5 | Develop- ment and transferability of apricot and grape EST mi- crosatellite markers across taxa显示文摘 | DECROOCQ V FAVE M G~ HAGEN L | 2003 | Theoretical and Ap- plied Genetics2003，106，5： | 1 |
| 6 | Microsatellite markers in the hexaploid Prunus domestica species and parentage lineage of three European plum cultivars using nuclear and chloroplast simple-sequence repeats显示文摘 | DECROOCQ V HAGEN L S FAVE M G EYQUARD J P PIERBONNET A | 2004 | Molecular Breeding2004，13，2： | 1 |
| 7 | Development and transferability of apricot and grape EST microsatellite markers across taxa显示文摘 | Decroocq V Fare M G Hagen L | 2003 | Theor Appl Genet2003，106，： | 1 |
| 8 | Epidemiology of proximal humerus fractures managed in a trauma center显示文摘 | Roux A Decroocq L El Batti S | 2012 | Orthop Traumatol Surg Res2012，98，： | 1 |
| 9 | Development and transferability of apricot and grape EST microsatellite markers across taxa显示文摘 | Decroocq V Fav M G Hagen L | 2003 | Theor Appl Genet2003，106，： | 1 |
| 10 | Development and transferability of apricot and grape EST microsatellite markers across taxa显示文摘 | V. Decroocq M. G. Favé L. Hagen L. Bordenave S. Decroocq | 2003 | Theoretical and Applied Genetics2003，，5： | 1 |
| 11 | Development and transferability of apricot and grape EST microsatellite markers across taxa显示文摘 | V. Decroocq M. G. Favé L. Hagen L. Bordenave S. Decroocq | 2003 | Theoretical and Applied Genetics2003，，5： | 1 |
| 12 | Epidemiology of proximal humerus fractures managed in a trauma center显示文摘 | Roux A Decroocq L El Batti S | 2012 | Orthop Traumatol Surg Res2012，98，： | 1 |
| 13 | Development and Transfer Ability of Apricot and Grape EST Microsatellite Markers Across Taxa显示文摘 | Decroocq V Fave M G Hagen L | 2003 | Theoretical and Applied Genetics2003，，106： | 1 |
| 14 | Isolation and characterization of polymorphic simple sequence repeat loci in Armillaria ostoyae显示文摘 | Langrell S R H Lung-escarmant B Decroocq S | 2001 | Molecular Ecology Notes2001，1，4： | 1 |
| 15 | Evelopment and transferability of apricot and grape ESTmicrosatellite markers across taxa显示文摘 | DEVROOCQ V FAV M G HAGEN L BORDENAVE L DECROOCQ S D | 2003 | Theor Appl Genet2003，106，： | 1 |
| 16 | Genetic analysis of the biosynthesis of 2-methoxy-3-isobutylpyrazine,a major grape-derived aroma compound impacting wine quality显示文摘 | GUILLAUMIE S IIG A RéTY S BRETTE M TROSSAT-MAGNIN C DECROOCQ S LéON C KEIME C YE T BALTEN-WECK-GUYOT R CLAUDEL P BORDENAVE L VANBRA-BANT S DUCHêNE E DELROT S DARRIET P HUGUENEYP GOMèS E | 2013 | Plant Physiology2013，162，2： | 1 |
| 17 | Epidemiology ofproximal humerus fractures managed in a trauma center 显示文摘 | Roux A Decroocq L El Batti S | 2012 | Orthop Traumatol Surg Res2012，98，6： | 1 |
| 18 | The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity,domestication and genome evolution显示文摘 | The International Peach Genome Iniative Verde I Abbott A G Scalabrin S Jung S Shu S Marroni F Zhebentyayeva T Dettori M T Grimwood J Cattonaro F Zuccolo A Rossini L Jenkins J Vendramin E Meisel L A Decroocq V Sosinski B Prochnik S Mitros T Policriti A Cip | | 0，，： | 1 |
| 19 | Development and transferability of apricot and grape EST microsatellite markers across taxa 显示文摘 | Decroocq V Fav6 M G Hagen L | 2003 | Theor Appl Genet2003，106，： | 1 |
| 20 | Development and transferability of aplicot and grape EST mocrosatellite markers across taxa显示文摘 | DECROOCQ V FAVE M G HAGEN L BORDENAVE L DECROOCQ S | 2003 | Theor Appl Genet2003，106，： | 1 |
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