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| 1 | Red River barrier and Pleistocene climatic fluctuations shaped the genetic structure of Microhyla fissipes complex (Anura: Microhylidae) in southern China and Indochina显示文摘 | Zhi-Yong YUAN Chatmongkon SUWANNAPOOM Fang YAN Nikolay A. POYARKOV JR Sang Ngoc NGUYEN Hong-man CHEN Siriwadee CHOMDEJ Robert W, MURPHY Jing CHE | 2016 | Current Zoology2016，62，6： | 11 |
| 2 | 863 genomes reveal the origin and domestication of chicken显示文摘Despite the substantial role that chickens have played in human societies across the world,both the geographic and temporal origins of their domestication remain controversial.To address this issue,we analyzed 863 genomes from a worldwide sampling of chickens and representatives of all four species of wild jungle fowl and each of the five subspecies of red jungle fowl(RJF).Our study suggests that domestic chickens were initially derived from the RJF subspecies Gallus gallus spadiceus whose present-day distribution is predominantly in southwestern China,northern Thailand and Myanmar.Following their domestication,chickens were translocated across Southeast and South Asia where they interbred locally with both RJF subspecies and other jungle fowl species.In addition,our results show that the White Leghorn chicken breed possesses a mosaic of divergent ancestries inherited from other subspecies of RJF.Despite the strong episodic gene flow from geographically divergent lineages of jungle fowls,our analyses show that domestic chickens undergo genetic adaptations that underlie their unique behavioral,morphological and reproductive traits.Our study provides novel insights into the evolutionary history of domestic chickens and a valuable resource to facilitate ongoing genetic and functional investigations of the world's most numerous domestic animal. | Ming-Shan Wang Mukesh Thakur Min-Sheng Peng Yu Jiang Laurent Alain Francois Frantz Ming Li Jin-Jin Zhang Sheng Wang Joris Peters Newton Otieno Otecko Chatmongkon Suwannapoom Xing Guo Zhu-Qing Zheng Ali Esmailizadeh Nalini Yasoda Hirimuthugoda Hidayat Ashari Sri Suladari Moch Syamsul Arifin Zein Szilvia Kusza Saeed Sohrabi Hamed Kharrati-Koopaee Quan-Kuan Shen Lin Zeng Min-Min Yang Ya-Jiang Wu Xing-Yan Yang Xue-Mei Lu Xin-Zheng Jia Qing-Hua Nie Susan Joy Lamont Emiliano Lasagna Simone Ceccobelli Humpita Gamaralalage Thilini Nisanka Gunwardana Thilina Madusanka Senasige Shao-Hong Feng Jing-Fang Si Hao Zhang Jie-Qiong Jin Ming-Li Li Yan-Hu Liu Hong-Man Chen Cheng Ma Shan-Shan Dai Abul Kashem Fazlul Haque Bhuiyan Muhammad Sajjad Khan Gamamada Liyanage Lalanie Pradeepa Silva Thi-Thuy Le Okeyo Ally Mwai Mohamed Nawaz Mohamed Ibrahim Megan Supple Beth Shapiro Olivier Hanotte Guojie Zhang Greger Larson Jian-Lin Han Dong-Dong Wu Ya-Ping Zhang | 2020 | Cell Research2020，30，8： | 7 |
| 3 | The Australasian frog family Ceratobatrachidae in China,Myanmar and Thailand:discovery of a new Himalayan forest frog clade显示文摘In an effort to study the systematic affinities and specieslevel phylogenetic relationships of the enigmatic anurans variably assigned to the genera Ingerana or Limnonectes(family Dicroglossidae),we col ected new molecular sequence data for five species including four Himalayan taxa,Limnonectes xizangensis,Lim.medogensis,Lim.alpina,Ingerana borealis and one southeast Asian species,I.tasanae,and analyzed these together with data from previous studies involving other ostensibly related taxa.Our surprising results demonstrate unequivocal y that Lim.xizangensis,Lim.medogensis and Lim.alpina form a strongly supported clade,the sister-group of the family Australasian forest frog family Ceratobatrachidae.This discovery requires an expansion of the definition of Ceratobatrachidae and represents the first record of this family in China.These three species are distinguished from the species of Ingerana and Limnonectes by the:(1)absence of interdigital webbing of the foot,(2)absence of termina discs on fingers and toes,(3)absence of circumargina grooves on the fingers and toes,and(4)absence of tarsal folds.Given their phylogenetic and morphologica distinctiveness,we assign them to the oldest available generic name for this clade,Liurana Dubois 1987,and transfer Liurana from Dicroglossidae to the family Ceratobatrachidae.In contrast,Ingerana tasanae was found to be clustered with strong support with the recently described genus Alcalus(Ceratobatrachidae),asmall clade of otherwise Sundaic species;this constitutes a new record of the family Ceratobatrachidae for Myanmar and Thailand.Final y,Ingerana borealis clustered with the 'true' Ingerana(family Dicroglossidae),for which the type species is I.tenasserimensis. | Fang YAN Ke JIANG Kai WANG Jie-Qiong JIN Chatmongkon SUWANNAPOOM Cheng LI Jens V.VINDUM Rafe M.BROWN Jing CHE State Key Laboratory of Genetic Resources and Evolution,Kunming Institute of Zoology,Chinese Academy of Sciences Southeast Asia Biodiversity Research Institute,Chinese Academy of Sciences Sam Noble Oklahoma Museum of Natural History and Department of Biology,University of Oklahoma School of Agriculture and Natural Resources,University of Phayao Imaging Biodiversity Expedition Department of Herpetology,California Academy of Sciences Biodiversity Institute and Department of Ecology and Evolutionary Biology,1345 Jayhawk Blvd,University of Kansas | 2016 | Zoological Research2016，37，1： | 4 |
| 4 | A new species of rain-pool frog (Dicroglossidae: Fejervarya) from western Thailand显示文摘We describe a new species, Fejervarya muangkanensis sp. nov., based on a series of specimens collected from Ban Tha Khanun, Thong Pha Phum District, Kanchanaburi Province, Thailand. The new species is easily distinguished from its congeners by morphological and molecular data, and can be diagnosed by the following characters:(1) small size(adult male snout-vent length(SVL) 33.5 mm; female SVL 40.0–40.9 mm);(2) tympanum small, discernible but unclear;(3) poorly developed toe webbing;(4) no lateral line system in adults;(5) characteristic 'Fejervaryan' lines present in females; and(6) femoral glands absent. Molecular phylogenetic analysis of mitochondrial 16 S r RNA further supports it as a distinct lineage and distinguishes it from its congeners for which sequences are available. | Chatmongkon Suwannapoom Zhi-Yong Yuan Ke Jiang Fang Yan Wei Gao Jing Che | 2017 | Zoological Research2017，38，5： | 3 |
| 5 | A new species of genus Fejervarya (Anura:Dicroglossidae) from northern Thailand显示文摘We describe a new species of frog in the dicroglossid genus Fejervarya from Ban Monjong,Omkoi District,Chiang Mai Province,northern Thailand.Analysis of DNA sequence data from the mitochondrial gene 16 S,advertisement calls,and morphological distinctiveness support recognition of the new species.Matrilineal genealogy suggests that the new population from Chiang Mai is a sister taxon to the South Asian clade that includes F.syhadrensis,F.granosa,and F.pierrei.The new species,Fejervarya chiangmaiensis sp.nov.,differs morphologically from its congeners by its relatively small body size and proportions and the presence of dorsal warts and dermal ridges.Discovery of this new species indicates that the biodiversity of amphibians in this region remains underestimated. | Chatmongkon SUWANNAPOOM Zhi-Yong YUAN Nikolay A.POYARKOV Jr. Fang YAN Somboon KAMTAEJA Robert W.MURPHY Jing CHE | 2016 | Zoological Research2016，37，6： | 2 |
| 6 | A new genus and three new species of miniaturized microhylid frogs from Indochina (Amphibia: Anura: Microhylidae: Asterophryinae)显示文摘We report on the discovery of a new genus of microhylid subfamily Asterophryinae from northern and eastern Indochina, containing three new species.Vietnamophryne Gen. nov. are secretive miniaturized frogs(SVL<21 mm) with a mostly semi-fossorial lifestyle. To assess phylogenetic relationships, we studied 12 S rRNA – 16 S rRNA mt DNA fragments with a final alignment of 2 591 bp for 53 microhylid species. Morphological and osteological characters were analyzed using micro-CT scanning and used to describe the new genus. Results of phylogenetic analyses assigned the new genus into the mainly Australasian subfamily Asterophryinae as a sister taxon to the genus Siamophryne from southern Indochina. The three specimens collected from Gia Lai Province in central Vietnam, Cao Bang Province in northern Vietnam, and Chiang Rai Province in northern Thailand proved to be separate species, different both in morphology and genetics(genetic divergence 3.1%≤P≤5.1%). Our work provides further evidence for the 'out of Indo-Eurasia'scenario for Asterophryinae, indicating that the initial cladogenesis and differentiation of this group of frogs occurred in the Indochina Peninsula. To date, each of the three new species of Vietnamophryne Gen. nov. is known only from a single specimen; thus,their distribution, life history, and conservation status require further study. | Nikolay A. Poyarkov Chatmongkon Suwannapoom Parinya Pawangkhanant Akrachai Aksornneam Tang Van Duong Dmitriy V. Korost Jing Che | 2018 | Zoological Research2018，39，3： | 2 |
| 7 | A new species of the genus Raorchestes(Anura:Rhacophoridae) from Yunnan Province, China显示文摘DEAR EDITOR,A new bush frog species, Raorchestes cangyuanensis sp. nov., from Cangyuan, Yunnan Province, China, is described based on morphological and molecular analyses. It differs from all known congeners by a combination of the following characters: body size small, adult snout-vent length (SVL) 16.1–20.0 mm in males (n=3);tympanum indistinct;tips of all fingers and toes expanded into discs with circummarginal grooves;rudimentary webbing between toes;fingers and toes with lateral dermal fringes;inner and outer metacarpal tubercles present;heels meeting when limbs held at right angles to body;crotch with a distinct black patch;discs of fingers and toes orange;male with external single subgular vocal sac and reddish nuptial pad at the base of first finger. | Yun-He Wu Chatmongkon Suwannapoom Kai Xu Jin-Min Chen Jie-Qiong Jin Hong-Man Chen Robert W. Murphy Jing Che | 2019 | Zoological Research2019，40，6： | 2 |
| 8 | How little is known about “the little brown frogs”:description of three new species of the genus Leptobrachella(Anura:Megophryidae)from Yunnan Province, China显示文摘Asian leaf-litter toads of the genus Leptobrachella represent a great anuran diversification in Asia.Previous studies have suggested that the diversity of this genus is still underestimated. During herpetological surveys from 2013 to 2018, a series of Leptobrachella specimens were collected from the international border areas in the southern and western parts of Yunnan Province, China.Subsequent analyses based on morphological and molecular data revealed three distinct and previously unknown lineages, which we formally describe as three new species herein. Among them, we describe a new species that occurs at the highest known elevation for Leptobrachella in China. Four species of Leptobrachella, including two new species, are found in the same reserve. Furthermore, our results suggest that the population from Longchuan County,Yunnan, may represent an additional new species of Leptobrachella, although we tentatively assigned it to Leptobrachella cf. yingjiangensis due to the small sample size examined. Lastly, we provide the first description of females of L. yingjiangensis. Our results further highlight that both micro-endemism and sympatric distributions of species are common patterns in Leptobrachella, that contribute to taxonomic and conservation challenges in these frogs. We provide an identification key for Leptobrachella known to occur in Yunnan. Given the lack of knowledge on species diversity of Leptobrachella along international border areas, we recommend that future studies include transboundary collaborative surveys. | Jin-Min Chen Kai Xu Nikolay A.Poyarkov Kai Wang Zhi-Yong Yuan Mian Hou Chatmongkon Suwannapoom Jian Wang Jing Che | 2020 | Zoological Research2020，41，3： | 1 |
| 9 | Was chicken domesticated in northern China?New evidence from mitochondrial genomes显示文摘The timing and location of chicken(Gallus gallus domesticus)domestication have remained controversial for over a century[1].Several researchers have proposed China as one of the early centers for chicken domestication[2].This is based on a few archaeological‘‘chicken'remains discovered in China(Table S1).Recently,one investigation detected mitochondrial DNA(mt DNA)haplotypes | Xun-He Huang Ya-Jiang Wu Yong-Wang Miao Min-Sheng Peng Xing Chen Dan-Lin He Chatmongkon Suwannapoom Bing-Wang Du Xian-Yao Li Zhuo-Xian Weng Si-Hua Jin Jiao-Jiao Song Ming-Shan Wang Jie-Bo Chen Wei-Na Li Newton Otieno Otecko Zhao-Yu Geng Xiang-Yong Qu Yan-Ping Wu Xiu-Rong Yang Jie-Qiong Jin Jian-Lin Han Fu-Sheng Zhong Xi-Quan Zhang Ya-Ping Zhang | 2018 | Science Bulletin2018，63，12： | 1 |
| 10 | Complete mitochondrial genome of the Thai Red Junglefowl (Gallus gallus) and phylogenetic analysis显示文摘DEAR EDITOR,In this study,we sequenced the complete mitochondrial genome(mitogenome)of the Thai Red Junglefowl(RJF;Gallus gallus)using the next-generation sequencing(NGS)platform of the Ion Torrent PGM.Samples were taken from Mae Wang District,Chiang Mai Province,northern Thailand.Our data showed the complete mitogenome to be 16 785bp in length,composed by 13 protein-coding genes,22tRNA genes,two rRNA genes,and one control region.The genome nucleotide composition was 30.3%A,23.7%T,32.5%C,and 13.5%G,resulting in a high percentage of | chatmongkon suwannapoom ya-jiang wu xing chen adeniyi c.adeola jing chen wen-zhi wang | 2018 | Zoological Research2018，39，2： | 1 |
| 11 | A New Species of the Genus Leptolalax(Anura: Megophryidae) from Northern Thailand显示文摘A new species of the genus Leptolalax is described from Doi Saket, Chiang Mai Province, northern Thailand. The new species is distinguished from its congeners by the following combination of characters: 1) adult size large(male SVL 45.8-52.5 mm); 2) tympanum distinct; 3) skin of dorsal surface mostly smooth, with distinct tubercles on dorsal and lateral parts of the body; 4) ventrolateral glandular ridge distinct and complete; 5) lateral body and groin covered with dark brown or black spots; 6) throat, chest, and belly nearly immaculate white; and 7) bi-colored iris, upper onethird golden, and lower two-thirds gray. Molecular phylogenetic analysis of mitochondrial 16S rRNA further distinguishes it from its congeners for which sequences are available. | Ke JIANG Fang YAN Chatmongkon SUWANNAPOOM Siriwadee CHOMDEJ Jing CHE | 2013 | Asian Herpetological Research2013，4，2： | 1 |
| 12 | A new species of Micryletta (Amphibia: Microhylidae) from southern Thailand显示文摘DEAR EDITOR,We report on a new species,Micryletta dissimulans sp.nov.,from the lowland forests of southern Thailand,which is described based on molecular and morphological evidence.The new species is characterized by a combination of the following characters:small body size (20.3-22.4 mm in males,24.4-26.7 mm in females);slender body habitus. | Chatmongkon Suwannapoom Tan Van Nguyen Parinya Pawangkhanant Vladislav A.Gorin Siriwadee Chomdej Jing Che Nikolay A.Poyarkov | 2020 | Zoological Research2020，41，5： | 1 |
| 13 | Counting stripes:revision of the Lipinia vittigera complex(Reptilia, Squamata, Scincidae) with description of two new species from Indochina显示文摘We provide an integrative taxonomic analysis of the Lipinia vittigera species complex from mainland Southeast Asia. Based on examination of external morphology, color pattern, and 681 base pairs of the cytochrome oxidase subunit I (COI) mitochondrial gene, we demonstrate the presence of four morphologically distinct lineages of Lipinia in Vietnam, Cambodia, Thailand, and Malaysia, showing a sequence divergence ranging 15.5%–20.4%. All discovered lineages are discretely diagnosable from one another by a combination of scalation traits and color patterns. A review of the published distribution data and a re-examination of available type material revealed the following results:(1) distribution of L. vittigera (Boulenger, 1894) sensu stricto is restricted to Sundaland and the Thai-Malay Peninsula south of the Isthmus of Kra;(2) L. microcercus (Boettger, 1901) stat. nov. is elevated to full species rank;the species has a wide distribution from central and southern Vietnam across Cambodia to eastern Thailand;we regard Lygosoma vittigerum kronfanum Smith, 1922 and Leiolopisma pranensis Cochran, 1930 as its junior synonyms;(3) Lipinia trivittata sp. nov. occurs in hilly areas of southern Vietnam, Cambodia, and eastern Thailand;and (4) Lipinia vassilievi sp. nov. is currently known only from a narrow area along the Vietnamese-Cambodian border in the foothills of the central Annamite Mountain Range. We further provide an identification key for Lipinia occurring in mainland Southeast Asia. | Nikolay A. Poyarkov Jr. Peter Geissler Vladislav A. Gorin Evgeniy A. Dunayev Timo Hartmann Chatmongkon Suwannapoom | 2019 | Zoological Research2019，40，5： | 0 |
| 14 | Taxonomic revision of genus Rohanixalus(Anura:Rhacophoridae)in China with description of one new species显示文摘DEAR EDITOR,Based upon morphological and molecular evidence,the authors revised the genus Rohanixalus Biju,Garg,Gokulakrishnan,Chandrakasan,Thammachoti,Ren,Gopika,Bisht,Hamidy and Shouche,2020(Anura:Rhacophoridae)in China through describing one new species,adding one species to the fauna(R.shyamrupus)and supplementing data on one species(Rohanixalus hansenae;Supplementary Materials). | Xiao-Long Liu Jun-Kai Huang Bryan L.Stuart Ren-Da Ai Justin M.Bernstein Chatmongkon Suwannapoom Siriwadee Chomdej Jing Che Zhi-Yong Yuan | 2023 | Zoological Research2023，44，6： | 0 |
| 15 | Mountain jade: A new high-elevation microendemic species of the genus Zhangixalus(Amphibia: Anura: Rhacophoridae)from Laos显示文摘DEAR EDITOR,We report on a new species, Zhangixalus melanoleucus sp.nov., from Phou Samsoum Mountain(PSM) in Xiengkhouang Province, northeastern Laos, based on an integrative taxonomic approach, including morphological, molecular, and bioacoustic lines of evidence. Morphologically, the new species can be distinguished from its congeners by a combination of the following diagnostic characters: medium body size(SVL 34.4–36.3 mm in males, 53.7 mm in a single female);dorsum smooth and green;chest and belly lacking spots;flanks, axillae, ventral surfaces of forearms, inguinal. | Peter Brakels Tan Van Nguyen Parinya Pawangkhanant Sabira S.Idiiatullina Sengvilay Lorphengsy Chatmongkon Suwannapoom Nikolay A.Poyarkov | 2023 | Zoological Research2023，44，2： | 0 |
| 16 | A New Cyrtodactylus Species(Reptila:Gekkonidae)from Nan Province,Northern Thailand显示文摘Here,a new species of bent-toed gecko,Cyrtodactylus phukhaensis sp.nov.,is described from Doi Phu Kha,Nan province,Thailand based on molecular and morphological evidence.A phylogeny based on NADH dehydrogenase subunit 2(ND2)and its flanking tRNAs places the new species in the chauquangensis group as a sister taxon to Cyrtodact ylus wayakonei.The new species can be differentiated from other members of the chauquangensis group by having a unique combina tion of 7 or 8 suprala bials,23-28 longitudinal rows of dorsal tubercles,8-10 infrala bials,9 femoral pores,7 precloacal pores,40-47 ventral scales,and a lack of bands crossingthe temporal area.In addition,results from a chromosome study of C.phukhaensis sp.nov.showed that the new species has a diploid chromosome number of 40 with a fundamental number of 46.The formula of the karyotype was as follows:2n(40)=2m+4sm+34t.Our findings suggest that further studies of Cyrtodactylus biodiversity in northern Thailand are needed. | Siriwadee CHOMDEJ Waranee PRADIT Parinya PAWANGKHANANT Chakkrapong KUENSAEN Apichaya PHUPANBAI Mali NAIDUANGCHAN Promporn PIBOON Korakot NGANVONGPANIT Zhiyong YUAN Yinpeng ZHANG Jing CHE Phuping SUCHARITAKUL Chatmongkon SUWANNAPOOM | 2022 | Asian Herpetological Research2022，13，2： | 0 |
| 17 | Author Correction:863 genomes reveal the origin and domestication of chicken显示文摘We apologize for a mistake in Fig.2 that was immediately identified by Edward McClure in our article published online on June 25,2020.In the labels of Fig.2a,b,the blue color should represent West Asian chickens while the brown color should depict South Asian chickens.The correct version of Fig.2 is shown below.This correction does not affect the description and conclusion of this article. | Ming-Shan Wang Mukesh Thakur Min-Sheng Pen Yu Jiang Laurent Alain Francois Frantz Ming Li Jin-Jin Zhang Sheng Wang Joris Peters Newton Otieno Otecko Chatmongkon Suwannapoom Xing Guo Zhu-Qing Zheng Ali Esmailizadeh Nalini Yasoda Hirimuthugoda Hidayat Ashari Sri Suladari Moch Syamsul Arifin Zein Szilvia Kusza Saeed Sohrabi Hamed Kharrati-Koopaee Quan-Kuan She Lin Zeng Min-Min Yang Ya-Jiang Wu Xing-Yan Yang Xue-Mei Lu Xin-Zheng Jia Qing-Hua Nie Susan Joy Lamont Emiliano Lasagna Simone Ceccobelli Humpita Gamaralalage Thilini Nisanka Gunwardana Thilina Madusanka Senasige Shao-Hong Feng Jing-Fang Si Hao Zhang Jie-Qiong Jin Ming-Li Li Yan-Hu Liu Hong-Man Chen Cheng Ma Shan-Shan Dai Abul Kashem Fazlul Haque Bhuiyan Muhammad Sajjad Khan Gamamad Liyanage Lalanie Pradeepa Silva Thi-Thuy Le Okeyo Ally Mwai Mohamed Nawaz Mohamed Ibrahim Megan Supple Beth Shapiro Olivier Hanotte Guojie Zhang Greger Larson Jian-Lin Han Dong-Dong Wu Ya-Ping Zhang | 2020 | Cell Research2020，30，9： | 0 |
| 18 | A new species of the genus Xenophrys(Anura:Megophryidae) from northern Thailand显示文摘DEAR EDITOR,Species of Xenophrys are conserved morphologically and live primarily in forests. In Thailand, the genus harbors many cryptic species. Herein we report the collection of specimens from Doi Inthanon, Chiang Mai Province, northern Thailand, which were identified previously as X. minor. Molecular and morphological analyses find that these specimens differ significantly from other known congeners, and therefore we describe a new species. Further, our phylogenetic analyses indicate that X. latidactyla is a junior synonym of X. palpebralespinosa. | Yun-He Wu Chatmongkon Suwannapoom Nikolay A. Poyarkov,Jr. Parinya Paawangkhanant Kai Xu Jie-Qiong Jin Robert W. Murphy Jing Che | 2019 | Zoological Research2019，40，6： | 0 |
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