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| 1 | Recently duplicated sesterterpene(C25) gene clusters in Arabidopsis thaliana modulate root microbiota显示文摘Land plants co-speciate with a diversity of continually expanding plant specialized metabolites(PSMs) and root microbial communities(microbiota).Homeostatic interactions between plants and root microbiota are essential for plant survival in natural environments.A growing appreciation of microbiota for plant health is fuelling rapid advances in genetic mechanisms of controlling microbiota by host plants.PSMs have long been proposed to mediate plant and single microbe interactions.However,the effects of PSMs,especially those evolutionarily new PSMs,on root microbiota at community level remain to be elucidated.Here,we discovered sesterterpenes in Arabidopsis thaliana,produced by recently duplicated prenyltransferase-terpene synthase(PT-TPS) gene clusters,with neo-functionalization.A single-residue substitution played a critical role in the acquisition of sesterterpene synthase(sesterTPS) activity in Brassicaceae plants.Moreover,we found that the absence of two root-specific sesterterpenoids,with similar chemical structure,significantly affected root microbiota assembly in similar patterns.Our results not only demonstrate the sensitivity of plant microbiota to PSMs but also establish a complete framework of host plants to control root microbiota composition through evolutionarily dynamic PSMs. | Qingwen Chen Ting Jiang Yong-Xin Liu Haili Liu Tao Zhao Zhixi Liu Xiangchao Gan Asis Hallab Xuemei Wang Juan He Yihua Ma Fengxia Zhang Tao Jin M. Eric Schranz Yong Wang Yang Bai Guodong Wang | 2019 | Science China(Life Sciences)2019，62，7： | 11 |
| 2 | MapMan4: A Refined Protein Classification and Annotation Framework Applicable to Multi-Omics Data Analysis显示文摘Genome sequences from over 200 plant species have already been published, with this number expected to increase rapidly due to advances in sequencing technologies. Once a new genome has been assembled and the genes identified, the functional annotation of their putative translational products, proteins, using ontologies is of key importance as it places the sequencing data in a biological context. Furthermore, to keep pace with rapid production of genome sequences, this functional annotation process must be fully automated. Here we present a redesigned and significantly enhanced MapMan4 framework, together with a revised version of the associated online Mercator annotation tool. Compared with the original MapMan, the new ontology has been expanded almost threefold and enforces stricter assignment rules. This framework was then incorporated into Mercator4, which has been upgraded to reflect current knowledge across the land plant group, providing protein annotations for all embryophytes with a comparably high quality. The annotation process has been optimized to allow a plant genome to be annotated in a matter of minutes. The output results continue to be compatible with the established MapMan desktop application. | Rainer Schwacke Gabriel Y.Ponce-Soto Kirsten Krause Anthony M.Bolger Borjana Arsova Asis Hallab Kristina Gruden Mark Stitt Marie E.Bolger Bjorn Usadel | 2019 | Molecular Plant2019，12，6： | 2 |
| 3 | Spinal implant debris-induced osteolysis 显示文摘 | Hallab N J Cunningham BW Jacobs JJ | 2003 | Spine2003，28，20： | 1 |
| 4 | Immune responses correlate with serum-metal in metal-on-metal hip arthroplasty显示文摘 | Hallab NJ Anderson S Caicedo M | 2004 | J Arthroplasty2004，19，83： | 1 |
| 5 | US Travelers' Images of the State of Mississippi as a Tourist Destination 显示文摘 | Hallab Z Kim K | 2006 | Tourism A- nalysis2006，，4： | 1 |
| 6 | Biologic effects of implant debris 显示文摘 | Hallab N J Jacobs JJ | 2009 | Bull Nyu Hosp Jt Dis2009，67，： | 1 |
| 7 | Biologic effects of implant debris显示文摘 | Hallab NJ Jacobs JJ | 2009 | Bull NYU Hosp Jt Dis2009，67，： | 1 |
| 8 | Invitro reactivity to implant metals demonstrates a person-dependent association with both T-Cell and B-Cell activation显示文摘 | Hallab NJ Caicedo M Epstein R | 2010 | J Biomed Mater Res2010，92，2： | 1 |
| 9 | Immune responses correlate with serum-metal in metal-on-metal hip arthroplasty 显示文摘 | Hallab NJ Anderson S Caicedo M | 2004 | J Arthroplasty2004，19，： | 1 |
| 10 | Thl type lymphocyte reactivity to metals in patients with total hip arthroplasty 显示文摘 | Hallab N J Caieedo M Finnegan A | 2008 | J Orthop Surg2008，3，： | 1 |
| 11 | Biologic effects of implant显示文摘 | Hallab NJ Jacobs JJ | 2009 | Bulletin NYU Hosp Jt Dis2009，67，2： | 1 |
| 12 | Synovial fluid biomarkers for periprosthetic infection显示文摘 | Deirmengian C Hallab N Tarabishy A | 2010 | Clin Or- thop Relat Res2010，468，8： | 1 |
| 13 | Biologic effects of implant debris显示文摘 | Hallab NJ Jacobs JJ | 2009 | Bull NYU Hosp Jt Dis2009，67，2： | 1 |
| 14 | Biomaterial optimization in total Jisc arthroplasty 显示文摘 | Link HD McAfee PC | 2003 | Spine2003，28，20： | 1 |
| 15 | Biologic effects of implant debris显示文摘 | Hallab NJ Jacobs JJ | 2009 | Bull NYU Hosp Jt Dis2009，67，2： | 1 |
| 16 | Evaluation of metanic and polymeric biomaterial surface energy and surface roughness characteristics for directed cell adhesion 显示文摘 | Hallab NJ Bundy KJ O'Connor K | 2001 | Tissue Engineering2001，7，1： | 1 |
| 17 | Stem diameter and rotational stability in revision total hip arthroplasty:a biomechanical analysis显示文摘 | Meneghini R M Hallab N J Berger R A | 2006 | Journal of Orthopaedic Surgery and Research2006，1，： | 1 |
| 18 | Multiple freeze-thaw cycled meniscal allograft tissue:A biomechanical,biochemical,and histologic analysis显示文摘 | Lewis PB Williams JM Hallab N | | 0，，01： | 1 |
| 19 | Asymptomatic prospective and retrospective cohorts with metal-on-metal hip arthroplasty indicate acquired lymphocyte reactivity varies with metal ion levels on a group basis显示文摘 | Hallab NJ Caicedo M Mc Allister K | 2013 | J Orthop Res2013，31，2： | 1 |
| 20 | Assessment of the Quality of Cottage Cheese Produced from Standard and Protein- fortified Skim Milk 显示文摘 | HALLAB K KOHEN C GRANDISON M A | 2007 | International Journal of Dairy Technology2007，60，2： | 1 |
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