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| 1 | The chromosome-scale genome reveals the evolution and diversification after the recent tetraploidization event in tea plant显示文摘Tea is one of the most popular nonalcoholic beverages due to its characteristic secondary metabolites with numerous health benefits.Although two draft genomes of tea plant(Camellia sinensis)have been published recently,the lack of chromosome-scale assembly hampers the understanding of the fundamental genomic architecture of tea plant and potential improvement.Here,we performed a genome-wide chromosome conformation capture technique(Hi-C)to obtain a chromosome-scale assembly based on the draft genome of C.sinensis var.sinensis and successfully ordered 2984.7 Mb(94.7%)scaffolds into 15 chromosomes.The scaffold N50 of the improved genome was 218.1 Mb,~157-fold higher than that of the draft genome.Collinearity comparison of genome sequences and two genetic maps validated the high contiguity and accuracy of the chromosome-scale assembly.We clarified that only one Camellia recent tetraploidization event(CRT,58.9–61.7 million years ago(Mya))occurred after the core-eudicot common hexaploidization event(146.6–152.7 Mya).Meanwhile,9243 genes(28.6%)occurred in tandem duplication,and most of these expanded after the CRT event.These gene duplicates increased functionally divergent genes that play important roles in tea-specific biosynthesis or stress response.Sixty-four catechin-and caffeine-related quantitative trait loci(QTLs)were anchored to chromosome assembly.Of these,two catechin-related QTL hotspots were derived from the CRT event,which illustrated that polyploidy has played a dramatic role in the diversification of tea germplasms.The availability of a chromosome-scale genome of tea plant holds great promise for the understanding of genome evolution and the discovery of novel genes contributing to agronomically beneficial traits in future breeding programs. | Jie-Dan Chen Chao Zheng Jian-Qiang Ma Chen-Kai Jiang Sezai Ercisli Ming-Zhe Yao Liang Chen | 2020 | Horticulture Research2020，7，1： | 17 |
| 2 | Chemical composition of white ( Morus alba ), red ( Morus rubra ) and black ( Morus nigra ) mulberry fruits显示文摘 | Sezai Ercisli Emine Orhan | 2006 | Food Chemistry2006，，4： | 2 |
| 3 | Chemical composition of fruits in some rose ( Rosa spp.) species显示文摘 | Sezai Ercisli | 2007 | Food Chemistry2007，，4： | 2 |
| 4 | Chemical composition of white ( Morus alba ), red ( Morus rubra ) and black ( Morus nigra ) mulberry fruits显示文摘 | Sezai Ercisli Emine Orhan | 2006 | Food Chemistry2006，，4： | 2 |
| 5 | Genetic diversity and phylogenetic relationships between and within wild Pistacia species populations and implications for its conservation显示文摘Although cultivation and utilization of Pistacia are fully exploited, the evolutionary history of the Pistacia genus and the relationships among the species and accessions is still not well understood. The aim of this study was to analyze random amplified polymorphic DNA(RAPD) in a total of 50 accessions of wild pistachio species, which included five populations Pistacia vera, Pistacia khinjuk,Pistacia atlantica, Pistacia mutica, and Pistacia eurycarpa.High levels of genetic diversity were detected within wild pistachio accessions, as revealed by using the unweighted pair-group method with arithmetic averaging and supported via analysis of molecular variance. The objectives of this investigation were to estimate marker indices, polymorphic information contents(PICs), and genetic similarities(GS)for RAPD markers; assess the genetic diversity of Pistacia species, using GS estimated from RAPD fingerprints and molecular characterization; and facilitate the use of markers in inter-specific introgression and cultivar improvement.Out of the 149 polymerase chain reaction fragments that were scored, 146(97.98 %) were polymorphic. Genetic similarities ranged from 0.3 to 0.86 %, marker indices ranged from 2.98 to 17.74 %, and PICs ranged from 0.80 to0.99 %. Our results provided great molecular identification of all assayed genotypes, which have shown that there is large quantity of genetic diversity among the pistachio accessions. This finding might render striking information in breeding management strategies for genetic conservation and cultivar development. | Parvaneh Iranjo Daryuoosh Nabati Ahmadi Karim Sorkheh Hamid Rajabi Memeari Sezai Ercisli | 2016 | Journal of Forestry Research2016，27，3： | 2 |
| 6 | Effects of plant growth promoting bacteria (PGPB) on yield, growth and nutrient contents of organically grown strawberry显示文摘 | Esitken A Yildiz H E Ercisli S | 2010 | Scientia Horticulturae2010，124，： | 1 |
| 7 | Effects of plant growth promoting rhizobacteria (PGPR) on yield,growth and nutrient contents in organically growing raspberry显示文摘 | ORHAN E ESITKEN A ERCISLI S | 2006 | Scientia Horticulturae2006，111，： | 1 |
| 8 | Effects of plant growth promoting rhizobacteria (PGPR) on rooting and root growth of kiwifruit(Actinidia deliciosa) stem cuttings显示文摘 | ERTURK Y ERCISLI S HAZNEDAR A | 2010 | Biolog- ieal Research2010，43，1： | 1 |
| 9 | Antibacterial activity and chemical constitutions of Ziziphora clinopodioides 显示文摘 | OZTURK S ERCISLI S | 2006 | Food Control2006，18，5： | 1 |
| 10 | Effects of plant growth promoting rhizobacteria (PGPR) on rooting and root growth of ki- wifruit (Actinidia deliciosa) stem cuttings 显示文摘 | Erturk Yasar Ercisli Sezai Haznedar Ayhan | 2010 | Biological Research2010，43，： | 1 |
| 11 | Effects of plant growth promoting bacteria(PGPB)on yield,growth and nutrient contents of organically grown strawberry显示文摘 | Esitken A Yildiz H E Ercisli S | 2010 | Sci Hortic-Amsterdam2010，124，： | 1 |
| 12 | Chemical composition of white (Morus alba),red (Morus rubra)and black(Morus nigra)mulberry fruits显示文摘 | Sezai Ercisli Emine Orhan | 2006 | Food Chemistry2006，103，2007： | 1 |
| 13 | The chemical composition of essential oil and in vitro antibacterial activities of essential oil and methanol extract of Ziziphora Persica Bunge 显示文摘 | Ozturk S Ercisli S | 2006 | Journal of Ethnopharmacology2006，106，3： | 1 |
| 14 | The chemical composition of essential oil and in vitro antibacterial activities of essential oil and methanol extract of Ziziphorapersica Bunge显示文摘 | Ozturk S Ercisli S | 2006 | Journal of Ethnophar-macology2006，106，3： | 1 |
| 15 | Antib acterial activity and chemical consti tutions of Ziziphora clinopodioides 显示文摘 | Ozturk S Ercisli S | 2007 | Food Cont2007，18，： | 1 |
| 16 | Antibacterial activity and chemical constitutions of Ziziphora clinopodioides显示文摘 | Ozturk S Ercisli S | 2007 | Food Control2007，18，5： | 1 |
| 17 | Chemical composition of white (Moras alba), red (Morus rubra) and black (Morus nigra) mulberry fruits显示文摘 | ERCISLI S ORHAN E | 2007 | Food Chemistry2007，103，4： | 1 |
| 18 | Antibacterial activity and chemical constitutions of Ziziphora clinopodioides 显示文摘 | Suzan Ozturk Sezai Ercisli | 2007 | Food Control2007，18，： | 1 |
| 19 | The chemical composition of essential oil and in vitro antibacterial activities of essential oil and methanol extract of Ziziphora persica Bunge显示文摘 | Suzan Ozturk Sczai Ercisli | 2006 | Journal of Ethno pharmacology2006，106，： | 1 |
| 20 | The genotypic effects on the chemical composition and antioxidant activity of sea buckthorn berries grown in Turkey显示文摘 | Sezai Ercisli Emine Orhan Ozlem Ozdemir | 2007 | Scientia Horticuhurae2007，115，： | 1 |
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