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| 1 | The mutational pattern of homologous recombination(HR)-associated genes and its relevance to the immunotherapeutic response in gastric cancer显示文摘Objective:Currently,there is an urgent need to identify immunotherapeutic biomarkers to increase the benefit of immune checkpoint inhibitors(ICIs)for patients with gastric cancer(GC).Homologous recombination deficiency(HRD)can modify the tumor immune microenvironment by increasing the presence of tumor-infiltrating lymphocytes and therefore might serve as a biomarker of immunotherapeutic response.We aimed to analyze the mutational pattern of HR-associated genes in Chinese patients with GC and its relevance to the tumor immune profile and clinical immunotherapeutic response.Methods:A panel of 543 cancer-associated genes was used to analyze genomic profiles in a cohort comprising 484 Chinese patients with GC.Correlations between HR gene mutations and tumor immunity or clinical outcomes were identified via bioinformatic analysis using 2 GC genomic datasets(TCGA and MSK-IMPACT).Results:Fifty-one of the 484(10.54%)patients carried at least one somatic mutation in an HR gene;ATM(16/484,3.31%)was among the most frequently mutated HR genes in the Chinese cohort.Mutations in HR genes were associated with elevated tumor mutational burden,enhanced immune activity,and microsatellite instability status.In the MSK-IMPACT cohort comprising 49 patients with stomach adenocarcinoma or gastroesophageal junction adenocarcinoma treated with ICIs,patients with HR-mut GC(n=12)had significantly better overall survival than those with HR-wt GC(n=37)(log-rank test,P<0.05).Conclusions:Our data suggest that detection of somatic mutations in HR genes might aid in identifying patients who might benefit from immune checkpoint blockade therapy. | Yue Fan Haifeng Ying Xueying Wu Huan Chen Ying Hu Henghui Zhang Lijia Wu Ying Yang Beibei Mao Lan Zheng | 2020 | Cancer Biology & Medicine2020，17，4： | 6 |
| 2 | Far-red light: A regulator of plant morphology and photosynthetic capacity显示文摘Plant photosynthetic capacity directly determines crop yield. Light quality regulates photosynthetic capacity. This review discusses plant responses to far-red light from the phenotypic to the molecular level, focusing specifically on the improvement of photosynthetic capacity by adjustment of photosynthetic electron transport and the path of light energy. Far-red light can also regulate leaf angle and increase plant height and leaf area, via expression of associated genes, to capture more light energy.Thus, far-red light regulates plant morphology and photosynthetic capacity. Identifying the mechanism of this regulation may lead to increased crop yields. | Tingting Tan Shenglan Li Yuanfang Fan Zhonglin Wang Muhammad Ali Raza Iram Shafiq Beibei Wang Xiaoling Wu Taiwen Yong Xiaochun Wang Yushan Wu Feng Yang Wenyu Yang | 2022 | The Crop Journal2022，10，2： | 4 |
| 3 | Nuclear miR-665 aggravates heart failure via suppressing phosphatase and tensin homolog transcription显示文摘Although numerous miRNAs have been discovered,their functions in the different subcellular organelles have remained obscure.In this study,we found that miR-665 was enriched in the nucleus of cardiomyocytes,and then investigated the underlying role of nuclear miR-665 in heart failure.RNA fluorescence in situ hybridization assays in human heart tissue sections and primary cardiomyocytes showed that miR-665 was localized in the nucleus of cardiomyocytes.Increased expression of nuclear miR-665 was observed not only in the cardiomyocytes isolated from the heart of mice treated in vivo by transverse aortic constriction(TAC),but also in phenylephrine(PE)-treated cultured cardiomyocytes in vitro.To further explore the role of miR-665 in heart failure,a type 9 recombinant adeno-associated virus(rAAV)system was employed to manipulate the expression of miR-665 in mice.Overexpression of miR-665 aggravated TAC-induced cardiac dysfunction,while down-expression of miR-665 showed opposite effects.Bioinformatic prediction and biological validation confirmed that the PTEN(phosphatase and tensin homolog)gene was one of the targets of miR-665 in the nucleus.Furthermore,restoring PTEN expression significantly eliminated the destructive effects of miR-665 over-expression in TAC-induced cardiac dysfunction.Our data showed that nuclear miR-665 aggravates heart failure via inhibiting PTEN expression,which provided a therapeutic approach for heart failure. | Jiahui Fan Xudong Zhang Xiang Nie Huaping Li Shuai Yuan Beibei Dai Jiabing Zhan Zheng Wen Jiangang Jiang Chen Chen Daowen Wang | 2020 | Science China(Life Sciences)2020，63，5： | 4 |
| 4 | Smad5 acts as an intracellular pH messenger and maintains bioenergetic homeostasis显示文摘环境暗示和细胞内部的 bioenergetic 状态深刻地影响细胞内部的 pH (pHi ) 。一个房间怎么对 pHi 变化作出回应维持 bioenergetic 动态平衡,留下逃犯。这里,我们显示出那 Smad5,发信号的形态基因的蛋白质(BMP ) 回答到 pHi 的骨头的一个描绘得好的下游的部件变化。冷、基本或张力亢进的条件增加 pHi,它接着在 Smad5 的 MH1 域以内声言不赞成控告的氨基酸簇,推动它到细胞质的从原子核的重定位。在另一方面,加热,酸或张力减退的条件减少 pHi,堵住 Smad5 的原子出口,并且因此引起它的原子累积。环境变化和 pHi 变化导致的 Smad5 的活跃 nucleocytoplasmic shuttling 独立于 BMP 发信号, carboxyl 终点 phosphorylation 和 Smad4。另外, Smad5 的脱离引起在区别识别了的神经发展过程人的 pluripotent 干细胞建模的细胞的 bioenergetic 动态平衡和破坏正常的长期、不可逆的 dysregulation。重要地,在 Smad5 缺乏的房间的这些新陈代谢、发展的赤字能仅仅由细胞质的 Smad5 被救。细胞质的 Smad5 身体上与 hexokinase 交往 1 并且加速 glycolysis。一起,我们的调查结果显示 Smad5 充当一个 pHi 送信人并且由调整细胞质的新陈代谢的机械维持房间的 bioenergetic 动态平衡。 | Yujiang Fang Zhongliang Liu Zhenyu Chen Xiangjie Xu Mengtao Xiao Yanyan Yu Yuanyuan Zhang Xiaobai Zhang Yanhua Du Cizhong Jiang Yuzheng Zhao Yiran Wang Beibei Fan Daniel Terheyden-Keighley Yang Liu Lei Shi Yi Hui Xin Zhang Bowen Zhang Hexi Feng Lin Ma Quanbin Zhang Guohua Jin Yi Yang Bin Xiang Ling Liu Xiaoqing Zhang | 2017 | Cell Research2017，27，9： | 2 |
| 5 | Genome-wide profiling of histone H3 lysine 27 trimethylation and its modification in response to chilling stress in grapevine leaves显示文摘Histone H3 lysine 27 trimethylation(H3K27me3) is a histone modification associated with transcriptional repression. However, insights into the genome-wide pattern of H3K27me3 in grapevines are limited. Here, anti-H3K27 chromatin immunoprecipitation(ChIP), high-throughput sequencing, and transcriptome analysis were performed using leaves of Vitis amurensis. The leaves were treated at 4°C for 2 h and 24 h and used to investigate changes in H3K27me3 under chilling treatment. The results show that H3K27me3 is well-distributed both in gene regions(-50%) and in the intergenic region(-50%) in the grapevine genome(Vitis vinifera ‘Pinot Noir PN40024'). H3K27me3 was found to be localized in8 368 annotated gene regions in all detected samples(leaves at normal temperature and under chilling treatments) and mainly enriched in gene bodies with the adjacent promoter and downstream areas. The short-term chilling treatments(4°C for 2 h) induced 2 793 gains and 305losses in H3K27me3 modification. Subsequently, 97.3% of the alterations were restored to original levels after 24 h treatment. The ChIP-qPCR for five differential peaks showed similar results to the data for ChIP-seq, indicating that the chilling-induced H3K27me3 modification is reliable.Integrative analysis of transcriptome and ChIP-seq results showed that the expression of H3K27me3 target genes was significantly lower than those of non-target genes, indicating transcriptional repression of H3K27me3 in grapevine leaves. Furthermore, histone methylation alterations were detected in 82 genes and were related to either repression or activation of their expression during chilling stress. The findings provide the genome-wide H3K27me3 patterns in grapevines and shed light on uncovering its regulation in chilling stress responses. | Zhenfei Zhu Qingyun Li Duncan Kiragu Gichuki Yujun Hou Yuanshuang Liu Huimin Zhou Chen Xu Linchuan Fang Linzhong Gong Beibei Zheng Wei Duan Peige Fan Qingfeng Wang Haiping Xin | 2023 | Horticultural Plant Journal2023，9，3： | 1 |
| 6 | Degradation of SARS-CoV-2 receptor ACE2 by the E3 ubiquitin ligase Skp2 in lung epithelial cells显示文摘An unexpected observation among the COVID-19 pandemic is that smokers constituted only 1.4%–18.5%of hospitalized adults,calling for an urgent investigation to determine the role of smoking in SARS-CoV-2 infection.Here,we show that cigarette smoke extract(CSE)and carcinogen benzo(a)pyrene(BaP)increase ACE2 mRNA but trigger ACE2 protein catabolism.BaP induces an aryl hydrocarbon receptor(AhR)-dependent upregulation of the ubiquitin E3 ligase Skp2 for ACE2 ubiquitination.ACE2 in lung tissues of non-smokers is higher than in smokers,consistent with the findings that tobacco carcinogens downregulate ACE2 in mice.Tobacco carcinogens inhibit SARS-CoV-2 spike protein pseudovirions infection of the cells.Given that tobacco smoke accounts for 8 million deaths including 2.1 million cancer deaths annually and Skp2 is an oncoprotein,tobacco use should not be recommended and cessation plan should be prepared for smokers in COVID-19 pandemic. | Guizhen Wang Qun Zhao Hui Zhang Fan Liang Chen Zhang Jun Wang Zhenyin Chen Ran Wu Hong Yu Beibei Sun Hua Guo Ruie Feng Kaifeng Xu Guangbiao Zhou | 2021 | Frontiers of Medicine2021，15，2： | 1 |
| 7 | Rpl10l通过补偿转录失活的Rpl10确保精子发生减数分裂的正常进行显示文摘文章简介课题组通过构建Rpl10l敲除小鼠,发现RPL10L在小鼠睾丸中特异表达且与精子发育相关。 | Long Jiang Tao Li Xingxia Zhang Beibei Zhang Changping Yu Yang Li Suixing Fan Xiaohua Jiang Teka Khan Qiaomei Hao Peng Xu Daita Nadano Mahmoud Huleihel Eitan Lunenfeld P.Jeremy Wang 张远伟 史庆华 | 2018 | 科学新闻2018，0，4： | 1 |
| 8 | A Kaposi’s sarcoma-associated herpes virus-encoded microRNA contributes to dilated cardiomyopathy显示文摘Dilated cardiomyopathy(DCM)is the leading cause of heart transplantation.By microRNA(miRNA)array,a Kaposi’s sarcoma-associated herpes virus(KSHV)-encoded miRNA,kshv-miR-K12-1-5p,was detected in patients with DCM.The KSHV DNA load and kshv-miR-K12-1-5p level in plasma from 696 patients with DCM were measured and these patients were followed-up. | Yanru Zhao Huaping Li Hengzhi Du Zhongwei Yin Mengying He Jiahui Fan Xiang Nie Yang Sun Huiying Hou Beibei Dai Xudong Zhang Yuanyuan Cai Kunying Jin Nan Ding Zheng Wen Jiang Chang Chen Chen Dao Wen Wang | 2023 | Signal Transduction and Targeted Therapy2023，8，7： | 1 |
| 9 | Effects of different soil amendments on physicochemical property of soda saline-alkali soil and crop yield in Northeast China显示文摘Soil amendment is one of the most effective methods to improve saline-alkali soil.In this study,laboratory experiments were conducted to verify the effect of 13 kinds of amendments and their combinations(Citric acid(NM),Phosphogypsum(LS),Aluminum sulfate+citric acid(AL+NM),Aluminum sulfate+phosphogypsum(AL+LS),Aluminum sulfate+citric acid+phosphogypsum(HH),Zeolite(Z),Acidified zeolite(ZH),Aluminum sulfate(AL),Aluminum sulfate+zeolite(AL+Z),Aluminum sulfate+acidified zeolite(AL+ZH),Poly Aluminum chloride(ALCL),Polyaluminium chloride+zeolite(ALCL+Z),Polyaluminium chloride+acidified zeolite(ALCL+ZH))on soil pH,metal cations content,exchangeable Na+,exchangeable sodium percentage(ESP)in the lab.And then the five most effective amendments(Z,ZH,AL,AL+Z,and AL+ZH)were chosen applying both in dry field(maize field)and paddy field to evaluate their improvement on soda saline-alkali soil and crop yield in the northeast Songnen Plain,China.The lab results showed that AL,AL+Z and AL+ZH treatments could significantly reduce the pH in soil solution and increase the content of metal cations.Z and ZH treatments could adsorb metal cations in soil.Both in dry and paddy fields,all five treatments could increase the soil saturated hydraulic conductivity(Ks),increased from 9.63 to 60.02 mm/d and 0.18 to 33.25 mm/d,respectively,of which the AL treatment was the best;all five treatments could reduce the content of exchangeable Na+in soil,and decrease by 38.62%-61.33%and 25.24%-71.53%,respectively,of which the AL+ZH treatment was the best;all treatments could reduce soil exchangeable sodium percentage,and decrease by 0.14-0.22 and 0.14-0.41,respectively,of which the AL+ZH treatment was the best;AL,AL+Z and AL+ZH treatments could improve soil organic matter content;all treatments could effectively improve the yield of crops,and increase 23.98%-60.75%and 52.51%-260.21%,respectively,of which the AL treatment was the best in dry field and the AL+ZH treatment was the best in paddy field.The effect of AL treatment was the best in dry field and AL+ZH treatment was the best in paddy field of soda saline-alkali soil.This study could provide instructive information for the chemical improvement and agricultural utilization of soda saline-alkali soils in the world. | Fan Xiao Beibei Zhou Hongbin Wang Manli Duan Lei Feng | 2022 | International Journal of Agricultural and Biological Engineering2022，15，1： | 0 |
| 10 | MUTYH is a potential prognostic biomarker and correlates with immune infiltrates in hepatocellular carcinoma显示文摘Background:Hepatocellular carcinoma(HCC)is a leading cause of cancer-related death worldwide.The development of biomarkers for early detection and monitoring of HCC has not shown significant prog-ress.Meanwhile,the second adenomatous polyposis-related gene,MUTYH,which encodes a DNA gly-cosylase,has been observed in its contribution to oxidative DNA damage repair.Abnormal expression of MUTYH can reduce cell survival rate.Therefore,this study investigated the usefulness of MUTYH in diagnosing and prognosis HCC.Materials and methods:Using The Cancer Genome Atlas(TCGA)data,we analyzed the prognostic value of MUTYH in HCC.We used logistic regression,Wilcoxon signed-rank test,and KruskaleWallis test to examine MUTYH expression concerning clinical-pathologic characteristics.Univariate and multivariate Cox regression methods and Kaplan-Meier analysis were applied to determine the related prognostic factors of HCC.The enrichment analysis(GSEA)was used to determine the critical pathways associated with MUTYH.The single-sample gene set enrichment analysis(ssGSEA)was conducted to examine the correlation between MUTYH expression and cancer immune infiltration.Results:The higher expression of MUTYH in HCC patients was associated with a poorer overall survival rate and a shorter disease-specific survival rate.The Kyoto Encyclopedia of Genes and Genomes(KEGG)analysis showed that all differentially expressed genes(DEGs)between the high and low expression levels of MUTYH significantly enriched in the trace ligand-receptor interaction,cell cycle,oocyte meiosis,gap junction,and DNA replication.Group analysis revealed the signals of their open access.The neuron system,M phase,DNA repair,Rho GTPase effector,and cell cycle checkpoints were significantly enriched.ssGSEA showed a positive correlation between MUTYH expression and the infiltration levels of Th2 cells,NK cells,and T helper cells.Moreover,a negative correlation was found between MUTYH expression and the infiltration levels of dendritic cells(DCs)and cytotoxic cells.Conclusions:MUTYH expression levels were positively correlated with immune checkpoint gene expression levels in HCC tissues.The expression level of MUTYH was related to the prognosis of HCC and the immune infiltration of HCC. | Fan Yang Qinghai Lian Beibei Ni Xiusheng Qiu Yizhan He Xiaoguang Zou Fangping He Wenjie Chen | 2022 | Liver Research2022，6，4： | 0 |
| 11 | Self-powered wireless body area network for multi-joint movements monitoring based on contact-separation direct current triboelectric nanogenerators显示文摘Body area network has attracted extensive attention for its applications in athletics,medical,diagnosis,and rehabilitation training in the next generation personalized health care solutions.Here,a contact-separation direct current triboelectric nanogenerators(CSDC-TENGs)based selfpowered wireless body area network(SWBAN)is reported that enables multi-joint movements monitoring for human motion.The CSDC-TENG is designed as a flexible active sensor with an internal contact switch,and the flexible substrate makes the TENG-sensor stick onto skin easily.Due to the internal switch,the CSDC-TENG could generate a DC current,a large instantaneous output voltage exceeds 700 V,and an instantaneous power can reach 1.076 W,which is more than 23000 times higher than that of the traditional contact-separation mode TENG in same size and materials without the switch.By coupling with flexible coil,the fixed high-frequency radio signals can be modulated and emitted clearly ranging from 6 to 16 MHz,which can be wirelessly received and demodulated through a reader.Moreover,the SWBAN is demonstrated in a real time monitoring system for joints motion.This work has realized the wearable TENG for self-powered wireless real-time monitoring of body movements driven by low-frequency human daily activities,which may promote a tremendous development of intelligent healthcare,wireless sensing system and body area network. | Feng Liu Yuan Feng Youchao Qi Guoxu Liu Han Zhou Yuan Lin Beibei Fan Zhi Zhang Sicheng Dong Chi Zhang | 2023 | InfoMat2023，5，8： | 0 |
| 12 | SOX2 heterozygous mutations cause multiple extraocular phenotypes in boys显示文摘To the Editor:The SRY-related high-mobility-group-box protein-2(SOX2)is most notably expressed in the eye,placodes,forebrain,and hypothalamus-pituitary and is involved in early embryonic development.[1]Loss-of-function mutations or deletions in SOX2 could lead to uni-or bi-lateral anophthalmia/microphthalmia(A/M)as well as other related disorders,such as anophthalmia/esophageal-genital syndrome.An increasing number of studies have found that SOX2 mutations can cause variable extraocular symptoms,including growth retardation,sensorineural hearing loss,mental retardation,no pubertal signs,and male genitourinary tract malformations(micropenis,cryptorchidism,and hypospadias).Indeed,cases with SOX2 pathogenic mutations but no or minor ocular symptoms have been reported less frequently.Several studies found that SOX2 heterozygous mutations cause typical signs of complete hypogonadism without major ocular malformations in men or women,such as isolated hypogonadotropic hypogonadism(HH),but no other HH pathogenic gene was identified.[2,3]Therefore,our study is the first to report the cases of three Chinese patients with SOX2 mutations referred due to micropenis and/or cryptorchidism combined with craniofacial deformities or intellectual disability. | Yi Wang Lijun Fan Xiaoya Ren Yanning Song Beibei Zhang Chunxiu Gong | 2022 | Chinese Medical Journal2022，，4： | 0 |
| 13 | Atomically Dispersed Manganese Lewis Acid Sites Catalyze Electrohydrogenation of Nitrogen to Ammonia显示文摘Ambient electrochemical nitrogen fixation is a promising and environmentally benign route for producing sustainable ammonia,but has been limited by the poor performance of existing catalysts that promote the balanced chemisorption of N2 and subsequent electrochemical activation and hydrogenation.Herein,we describe the highly selective and efficient electrohydrogenation of nitrogen to ammonia using a hollow nanorod-based hierarchically graphitic carbon electrocatalyst with abundant atomically dispersed Mn sites.We discovered that the electron interactions strengthen the interfacial binding between nitrogen and active Mn Lewis acidic hotspots.The Lewis acid-base interactions promote the chemisorption and lock up nitrogen on the active sites and suppress proton adsorption.The proton-coupled electron transfer cleavage of the nitrogen triple bond through an associative mechanism was confirmed under lower overpotential,which delivered high ammonia yield of 67.5μg h−1 mgcat.−1 and Faradaic efficiency of 13.7% at−0.25 V versus the reversible hydrogen electrode,along with∼100% selectivity and significantly enhanced electrochemical stability(about 88.8% current retention over 50 h potentiostatic test)under mild conditions.Our strategy is versatile to tailor the nitrogen fixation performance of single-atom catalysts with atomic accuracy. | Zhoutai Shang Bin Song Hongbao Li Hong Zhang Fan Feng Jacob Kaelin Wenli Zhang Beibei Xie Yingwen Cheng Ke Lu Qianwang Chen | 2022 | CCS Chemistry2022，4，6： | 0 |
| 14 | Synthesis of amphiphilic peroxophosphomolybdates for oxidative desulfurization of fuels in ionic liquids显示文摘Three amphiphilic peroxophosphomolybdates[C_4mim]_3PMo_4O_(24),[C_8mim]_3PMo_4O_(24)and[C_(16)mim]_3PMo_4O_(24)were synthesized and characterized.These catalysts were used for extraction and catalytic oxidative desulfurization of fuel with H_2O_2as an oxidant and ionic liquid[C_4mim]BF_4as an extractant.It was found that[C_(16)mim]_3PMo_4O_(24)showed the highest catalytic activity and the sulfur content could decrease to 7.5 ppm.In contrast,the desulfurization system shows very low performance without H_2O_2or ionic liquid.The detailed reaction conditions were optimized including reaction time,temperature,the dosage of H_2O_2and catalyst,and different sulfur compounds.After the reaction,the catalysts and the ionic liquid can be cycled 8 times with a little decrease in desulfurization efficiency. | Beibei Zhang Wei Jiang Xiaonan Fan Ming Zhang Yanchen Wei Jing He Changfeng Li Huaming Li Wenshuai Zhu | 2018 | Petroleum Science2018，15，4： | 0 |
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