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4篇 您的检索式:作者名="Kenneth M.Olsen"
    题名 作者 年代 出处 被引量
1The Genomes of the Allohexaploid Echinochloa crus-galli and Its Progenitors Provide Insights into Polyploidization-Driven Adaptation显示文摘The hexaploid species Echinochloa crus-galli is one of the most detrimental weeds in crop fields,especially in rice paddies.Its evolutionary history is similar to that of bread wheat,arising through polyploidization after hybridization between a tetraploid and a diploid species.In this study,we generated and analyzed high-quality genome sequences of diploid(E.haploclada),tetraploid(E.oryzicola),and hexaploid(E.crus-galli)Echinochloa species.Gene family analysis showed a significant loss of disease-resistance genes such as those encoding NB-ARC domain-containing proteins during Echinochloa polyploidization,contrary to their significant expansionduring wheat polyploidization,suggesting that natural selection might favor reduced investment in resistance in this weed to maximize its growth and reproduction.In contrast to the asymmetric patterns of genome evolution observed in wheat and other crops,no significant differences in selection pressure were detected between the subgenomes in E.oryzicola and E.crus-galli.In addition,distinctive differences in subgenome transcriptome dynamics during hexaploidization were observed between E.crus-galli and bread wheat.Collectively,our study documents genomic mechanisms underlying the adaptation of a major agricultural weed during polyploidization.The genomic and transcriptomic resources of three Echinochloa species and new insights into the polyploidization-driven adaptive evolution would be useful for future breeding cereal crops.Chu-Yu Ye Dongya Wu Lingfeng Mao Lei Jia Jie Qiu Sangting Lao Meihong Chen Bowen Jiang Wei Tang Qiong Peng Lang Pan Lifeng Wang Xiaoxiao Feng Longbiao Guo Chulong Zhang Elizabeth A.Kellogg Kenneth M.Olsen Lianyang Bai Longjiang Fan 2020Molecular Plant2020,13,9:4
2Association between nonsynonymous mutations of starch synthase IIa and starch quality in rice (Oryza sativa)显示文摘GuoqinYu Kenneth M.Olsen Barbara A.Schaal 2010New Phytologist2010,,2:1
3Weedy rice, a hidden gold mine in the paddy field显示文摘Weedy rice(Oryza spp.)is an increasingly invasive paddy weed,which mimics cultivated rice at the seedling stage but is distinguished from cultivated rice with strong seed shattering and seed dormancy,which are typical phenotypic characteristics of wild rice.On the origins of this conspecific form of cultivated rice(Oryza sativa),four hypotheses have been proposed and debated for decades:(1)origination from wild rice(Oryza rufipogon or possibly other wild Oryza species);(2)origination following hybridization between wild and cultivated rice;(3)direct descent from escaped cultivated rice;and(4)intervarietal hybridization between different domesticated rice varieties(Ellstrand et al.,2010).Recent population genomic investigations based on whole-genome variation provide powerful phylogenetic and demographic evidence for the de-domestication origination of weedy rice(Li et al.,2017;Qiu et al.,2017,Qiu et al.,2020;Sun et al.,2019).Dongya Wu Jie Qiu Jian Sun Beng-Kah Song Kenneth M.Olsen Longjiang Fan 2022Molecular Plant2022,15,4:0
4The rice pangenome branches out显示文摘The power of genome-enabled research depends not only on the quality of individual genome assemblies,but also the extent to which they collectively represent the natural variation of a study system.In a recent Cell Research paper,Shang et al.make an important advance in our understanding of rice genomes with the release of the first rice‘super-pangenome’,which encompasses the pangenome of domesticated Asian rice plus three closely related species.Kenneth M.Olsen 2022Cell Research2022,32,10:0
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