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1A multi-locus backbone tree for Pestalotiopsis, with a polyphasic characterization of 14 new species显示文摘Pestalotiopsis is a taxonomically confused,pathogenic and chemically creative genus requiring a critical reexamination using a multi-gene phylogeny based on ex-type and ex-epitype cultures.In this study 40 isolates of Pestalotiopsis,comprised of 28 strains collected from living and dead plant material of various host plants from China were studied by means of morphology and analysis of ITS,β–tubulin and tef1 gene sequence data.Based on molecular and morphological data we describe 14 new species(Pestalotiopsis asiatica,P.chinensis,P.chrysea,P.clavata,P.diversiseta,P.ellipsospora,P.inflexa,P.intermedia,P.linearis,P.rosea,P.saprophyta,P.umberspora,P.unicolor and P.verruculosa)and three species are epitypified(P.adusta,P.clavispora and P.foedans).Of the 10 gene regions(ACT,β-tubulin,CAL,GPDH,GS,ITS,LSU,RPB 1,SSU and tef1)utilized to resolve cryptic Pestalotiopsis species,ITS,β–tubulin and tef1 proved to be the better markers.The other gene regions were less useful due to poor success in PCR amplification and/or in their ability to resolve species boundaries.As a single gene tef1 met the requirements for an ideal candidate and functions well for species delimitation due to its better species resolution and PCR success.Althoughβ-tubulin showed fairly good differences among species,a combination of ITS,β-tubulin and tef1 gene data gave the best resolution as compared to single gene analysis.This work provides a backbone tree for 22 ex-type/epitypified species of Pestalotiopsis and can be used in future studies of the genus.Sajeewa S.N.Maharachchikumbura Liang Dong Guo Lei Cai Ekachai Chukeatirote Wen Ping Wu Xiang Sun Pedro W.Crous D.Jayarama Bhat Eric H.C.McKenzie Ali H.Bahkali Kevin D.Hyde 2012Fungal Diversity2012,,5:9
2Fungal diversity notes 367-490:taxonomic and phylogenetic contributions to fungal taxa显示文摘This is a continuity of a series of taxonomic papers where materials are examined,described and novel combinations are proposed where necessary to improve our traditional species concepts and provide updates on their classification.In addition to extensive morphological descriptions and appropriate asexual and sexual connections,DNA sequence data are also analysed from concatenated datasets(rDNA,TEF-a,RBP2 and b-Tubulin)to infer phylogenetic relationships and substantiate systematic position of taxa within appropriate ranks.Wherever new species or combinations are being proposed,we apply an integrative approach(morphological and molecular data as well as ecological features wherever applicable).Notes on 125 fungal taxa are compiled in this paper,including eight new genera,101 new species,two new combinations,one neotype,four reference specimens,new host or distribution records for eight species and one alternative morphs.The new genera introduced in this paper are Alloarthopyrenia,Arundellina,Camarosporioides,Neomassaria,Neomassarina,Neotruncatella,Paracapsulospora and Pseudophaeosphaeria.The new species are Alfaria spartii,Alloarthopyrenia italica,Anthostomella ravenna,An.thailandica,Arthrinium paraphaeospermum,Arundellina typhae,Aspergillus koreanus,Asterina cynometrae,Bertiella ellipsoidea,Blastophorum aquaticum,Cainia globosa,Camarosporioides phragmitis,Ceramothyrium menglunense,Chaetosphaeronema achilleae,Chlamydotubeufia helicospora,Ciliochorella phanericola,Clavulinopsis aurantiaca,Colletotrichum insertae,Comoclathris italica,Coronophora myricoides,Cortinarius fulvescentoideus,Co.nymphatus,Co.pseudobulliardioides,Co.tenuifulvescens,Cunninghamella gigacellularis,Cyathus pyristriatus,Cytospora cotini,Dematiopleospora alliariae,De.cirsii,Diaporthe aseana,Di.garethjonesii,Distoseptispora multiseptata,Dis.tectonae,Dis.tectonigena,Dothiora buxi,Emericellopsis persica,Gloniopsis calami,Helicoma guttulatum,Helvella floriforma,H.oblongispora,Hermatomyces subiculosa,Juncaceicola italica,Lactarius dirkii,Lentithecium unicellulare,Le.voraginesporum,Leptosphaeria cirsii,Leptosphaeria irregularis,Leptospora galii,Le.thailandica,Lindgomyces pseudomadisonensis,Lophiotrema bambusae,Lo.fallopiae,Meliola citri-maximae,Minimelanolocus submersus,Montagnula cirsii,Mortierella fluviae,Muriphaeosphaeria ambrosiae,Neodidymelliopsis ranunculi,Neomassaria fabacearum,Neomassarina thailandica,Neomicrosphaeropsis cytisi,Neo.cytisinus,Neo.minima,Neopestalotiopsis cocoe¨s,Neopestalotiopsis musae,Neoroussoella lenispora,Neotorula submersa,Neotruncatella endophytica,Nodulosphaeria italica,Occultibambusa aquatica,Oc.chiangraiensis,Ophiocordyceps hemisphaerica,Op.lacrimoidis,Paracapsulospora metroxyli,Pestalotiopsis sequoiae,Peziza fruticosa,Pleurotrema thailandica,Poaceicola arundinis,Polyporus mangshanensis,Pseudocoleophoma typhicola,Pseudodictyosporium thailandica,Pseudophaeosphaeria rubi,Purpureocillium sodanum,Ramariopsis atlantica,Rhodocybe griseoaurantia,Rh.indica,Rh.luteobrunnea,Russula indoalba,Ru.pseudoamoenicolor,Sporidesmium aquaticivaginatum,Sp.olivaceoconidium,Sp.pyriformatum,Stagonospora forlicesenensis,Stagonosporopsis centaureae,Terriera thailandica,Tremateia arundicola,Tr.guiyangensis,Trichomerium bambusae,Tubeufia hyalospora,Tu.roseohelicospora and Wojnowicia italica.New combinations are given for Hermatomyces mirum and Pallidocercospora thailandica.A neotype is proposed for Cortinarius fulvescens.Reference specimens are given for Aquaphila albicans,Leptospora rubella,Platychora ulmi and Meliola pseudosasae,while new host or distribution records are provided for Diaporthe eres,Di.siamensis,Di.foeniculina,Dothiorella iranica,Do.sarmentorum,Do.vidmadera,Helvella tinta and Vaginatispora fuckelii,with full taxonomic details.An asexual state is also reported for the first time in Neoacanthostigma septoconstrictum.This paper contributes to a more comprehensive update and improved identification of many ascomycetes and basiodiomycetes.Kevin D.Hyde Sinang Hongsanan Rajesh Jeewon D.Jayarama Bhat Eric H.C.McKenzie E.B.Gareth Jones Rungtiwa Phookamsak Hiran A.Ariyawansa Saranyaphat Boonmee Qi Zhao Faten Awad Abdel-Aziz Mohamed A.Abdel-Wahab Supharat Banmai Putarak Chomnunti Bao-Kai Cui Dinushani A.Daranagama Kanad Das Monika C.Dayarathne Nimali Ide Silva Asha J.Dissanayake Mingkwan Doilom Anusha H.Ekanayaka Tatiana Baptista Gibertoni Aristóteles Góes-Neto Shi-Ke Huang Subashini C.Jayasiri Ruvishika S.Jayawardena Sirinapa Konta Hyang Burm Lee Wen-Jing Li Chuan-Gen Lin Jian-Kui Liu Yong-Zhong Lu Zong-Long Luo Ishara S.Manawasinghe Patinjareveettil Manimohan Ausana Mapook Tuula Niskanen Chada Norphanphoun Moslem Papizadeh Rekhani H.Perera Chayanard Phukhamsakda Christian Richter AndréL.C.Mde A.Santiago E.Ricardo Drechsler-Santos Indunil C.Senanayake Kazuaki Tanaka T.M.D.S.Tennakoon Kasun M.Thambugala Qing Tian Saowaluck Tibpromma Benjarong Thongbai Alfredo Vizzini Dhanushka N.Wanasinghe Nalin N.Wijayawardene Hai-Xia Wu Jing Yang Xiang-Yu Zeng Huang Zhang Jin-Feng Zhang Timur S.Bulgakov Erio Camporesi Ali H.Bahkali Mohammad A.Amoozegar Lidia Silva Araujo-Neta Joseph F.Ammirati Abhishek Baghela R.P.Bhatt Dimitar Bojantchev Bart Buyck Gladstone Alves da Silva Catarina Letícia Ferreira de Lima Rafael JoséVilela de Oliveira Carlos Alberto Fragoso de Souza Yu-Cheng Dai Bálint Dima Tham Thi Duong Enrico Ercole Fernando Mafalda-Freire Aniket Ghosh Akira Hashimoto Sutakorn Kamolhan Ji-Chuan Kang Samantha C.Karunarathna Paul M.Kirk Ilkka Kytovuori Angela Lantieri Kare Liimatainen Zuo-Yi Liu Xing-Zhong Liu Robert Lücking Gianfranco Medardi Peter E.Mortimer Thi Thuong Thuong Nguyen Itthayakorn Promputtha K.N.Anil Raj Mateus A.Reck Saisamorn Lumyong Seyed Abolhassan Shahzadeh-Fazeli Marc Stadler Mohammad Reza Soudi Hong-Yan Su Takumasa Takahashi Narumon Tangthirasunun Priyanka Uniyal Yong Wang Ting-Chi Wen Jian-Chu Xu Zhong-Kai Zhang Yong-Chang Zhao Jun-Liang Zhou Lin Zhu 2016Fungal Diversity2016,,5:2
3Bambusicolous fungi显示文摘Fourty-three species of microfungi from bamboo are treated,including one new family,Occultibambusaceae,three new genera,Neoanthostomella,Occultibambusa and Seriascoma,27 new species,one renamed species and 15 redescribed or re-illustrated species,and four designated reference specimens are treated in this paper,the majority of which are saprobic on dead culms.To determine species identification,separate phylogenetical analyses for each group are carried out,based on molecular data from this study and sequences downloaded from GenBank.Morphologically similar species and phylogenetically close taxa are compared and discussed.In addition a list of bambusicolous fungi published since Hyde and colleagues in 2002 is provided.Dong Qin Dai Rungtiwa Phookamsak Nalin N.Wijayawardene Wen Jing Li D.Jayarama Bhat Jian Chu Xu Joanne E.Taylor Kevin D.Hyde E.Chukeatirote 2017Fungal Diversity2017,,1:2
4Naming and outline of Dothideomycetes-2014 including proposals for the protection or suppression of generic names显示文摘Article 59.1,of the International Code of Nomenclature for Algae,Fungi,and Plants(ICN;Melbourne Code),which addresses the nomenclature of pleomorphic fungi,became effective from 30 July 2011.Since that date,each fungal species can have one nomenclaturally correct name in a particular classification.All other previously used names for this species will be considered as synonyms.The older generic epithet takes priority over the younger name.Any widely used younger names proposed for use,must comply with Art.57.2 and their usage should be approved by the Nomenclature Committee for Fungi(NCF).In this paper,we list all genera currently accepted by us in Dothideomycetes(belonging to 23 orders and 110 families),including pleomorphic and nonpleomorphic genera.In the case of pleomorphic genera,we follow the rulings of the current ICN and propose single generic names for future usage.The taxonomic placements of 1261 genera are listed as an outline.Protected names and suppressed names for 34 pleomorphic genera are listed separately.Notes and justifications are provided for possible proposed names after the list of genera.Notes are also provided on recent advances in our understanding of asexual and sexual morph linkages in Dothideomycetes.A phylogenetic tree based on four gene analyses supported 23 orders and 75 families,while 35 families still lack molecular data.Nalin N.Wijayawardene Pedro W.Crous Paul M.Kirk David L.Hawksworth Saranyaphat Boonmee Uwe Braun Dong-Qin Dai Melvina J.D’souza Paul Diederich Asha Dissanayake Mingkhuan Doilom Singang Hongsanan E.B.Gareth Jones Johannes Z.Groenewald Ruvishika Jayawardena James D.Lawrey Jian-Kui Liu Robert Lücking Hugo Madrid Dimuthu S.Manamgoda Lucia Muggia Matthew P.Nelsen Rungtiwa Phookamsak Satinee Suetrong Kazuaki Tanaka Kasun M.Thambugala Dhanushka N.Wanasinghe Saowanee Wikee Ying Zhang Andre Aptroot H.A.Ariyawansa Ali H.Bahkali D.Jayarama Bhat Cécile Gueidan Putarak Chomnunti G.Sybren De Hoog Kerry Knudsen Wen-Jing Li Eric H.C.McKenzie Andrew N.Miller Alan J.L.Phillips Marcin Piatek Huzefa A.Raja Roger S.Shivas Bernad Slippers Joanne E.Taylor Qing Tian Yong Wang Joyce H.C.Woudenberg Lei Cai Walter M.Jaklitsch Kevin D.Hyde 2014Fungal Diversity2014,,6:2
5A taxonomic reassessment of Tubeufiales based on multi-locus phylogeny and morphology显示文摘This study deals with an extensive taxonomic reevaluation focusing on phylogenetic relationships and morphological characterization of Tubeufiales,especially those helicosporous hyphomycetes which are difficult to identify.Based on evidence from DNA sequence data and morphology,we introduce 13 new genera in the family Tubeufiaceae,viz.Acanthotubeufia,Dematiohelicoma,Dematiohelicomyces,Dematiohelicosporum,Dematiotubeufia,Helicoarctatus,Heli-cohyalinum,Helicotruncatum,Neochlamydotubeufia,Neohelicoma,Pleurohelicosporium,Pseudohelicomyces and Pseu-dohelicoon;transfer Chaetosphaerulina from Dothideomycetes genera incertae sedis,and Artocarpomyces and Helicodochium from Ascomycetes genera incertae sedis into Tubeufiaceae;introduce 52 new species,viz.Berkleasmium fusiforme,B.longisporum,Chlamydotubeufia cylindrica,Dematiohelicosporum guttulatum,Helicoarctatus aquaticus,Helicodochium aquaticum,Helicohyalinum infundibulum,Helicoma aquaticum,H.brunneisporum,H.cocois,H.rufum,H.fusiforme,H.longisporum,H.multiseptatum,H.rubriappendiculatum,H.septoconstrictum,H.tectonae,Helicomyces hyalosporus,Helicosporium aquaticum,H.flavisporum,H.setiferum,H.vesicarium,H.viridiflavum,Neochlamydo-tubeufia fusiformis,Neohelicomyces hyalosporus,Neohelicosporium acrogenisporum,N.astrictum,N.ellipsoideum,N.irregulare,N.krabiense,N.laxisporum,N.ovoideum,Pleurohelicosporium parvisporum,Pseudohelicomyces aquaticus,P.hyalosporus,Tubeufia abundata,T.bambusicola,T.brevis,T.brunnea,T.chlamydospora,T.dictyospora,T.eccentrica,T.fangchengensis,T.hechiensis,T.inaequalis,T.krabiensis,T.rubra,T.sessilis,T.sympodihylospora,T.sympodilaxispora,T.taiwanensis and T.tratensis;provide 43 new combinations,viz.Acanthohelicospora guianensis,Acanthotubeufia filiforme,Berkleasmium aquatica,B.guangxiense,B.latisporum,B.thailandicum,Dematiohelicoma perelegans,D.pulchrum,Dematiohelicomyces helicosporus,Dematiotubeufia chiangraiensis,Helicohyalinum aquaticum,Helicoma eli-norae,H.gigasporum,H.hongkongense,H.linderi,H.nematosporum,H.pannosum,H.serpentinum,Helicomyces chiayiensis,Helicotruncatum palmigenum,Neochlamydotubeufia khunkornensis,Neohelicoma fagacearum,Neoheli-comyces pallidus,Neohelicosporium abuense,N.aurantiellum,N.griseum,N.morganii,N.myrtacearum,N.nizam-abadense,N.sympodiophorum,N.taiwanense,N.vesiculiferum,Pseudohelicomyces indicus,P.paludosus,P.talbotii,Pseudohelicoon gigantisporum,P.subglobosum,Tubeufia dentophora,T.geniculata,T.lilliputea,T.machaerinae,T.sympodiophora and T.xylophila;introduce 16 new records,viz.Dictyospora thailandica,Helicomyces colligatus,H.torquatus,Neohelicosporium guangxiense,N.hyalosporum,N.parvisporum,Thaxteriellopsis lignicola,Tubeufia aquatica,T.chiangmaiensis,T.cylindrothecia,T.filiformis,T.guangxiensis,T.laxispora,T.parvispora,T.roseohelicospora and T.ectonae.The taxonomy of Helicoma,Helicomyces and Helicosporium is revisited based on phylogenetic analyses and morphological evidence.Neorhamphoria is transferred to Bezerromycetaceae.Three species are excluded from the genus Chlamydotubeufia,twelve species from Helicoma,four species from Helicomyces,25 species from Helicosporium,six species from Neoacanthostigma and one species from Tubeufia.A multi-gene phylogenetic tree based on maximum likelihood and Bayesian analyses of ITS,LSU,RPB2 and TEF1a sequence data of species of Tubeufiales is provided.Detailed descriptions and illustrations are provided,as well as the morphological comparison with similar taxa are explored.The checklist of accepted Tubeufiales species and re-organised Tubeufiales species are provided.Yong-Zhong Lu Jian-Kui(Jack)Liu Kevin D.Hyde Rajesh Jeewon Ji-Chuan Kang Cui Fan Saranyaphat Boonmee D.Jayarama Bhat Zong-Long Luo Chuan-Gen Lin Prapassorn Damrongkool Eungwanichayapant 2018Fungal Diversity2018,,5:1
6Fungal diversity notes 253-366:taxonomic and phylogenetic contributions to fungal taxa显示文摘Notes on 113 fungal taxa are compiled in this paper,including 11 new genera,89 new species,one new subspecies,three new combinations and seven reference specimens.Awide geographic and taxonomic range of fungal taxa are detailed.In the Ascomycota the new genera Angustospora(Testudinaceae),Camporesia(Xylariaceae),Clematidis,Crassiparies(Pleosporales genera incertae sedis),Farasanispora,Longiostiolum(Pleosporales genera incertae sedis),Multilocularia(Parabambusicolaceae),Neophaeocryptopus(Dothideaceae),Parameliola(Pleosporales genera incertae sedis),and Towyspora(Lentitheciaceae)are introduced.Newly introduced species are Angustospora nilensis,Aniptodera aquibella,Annulohypoxylon albidiscum,Astrocystis thailandica,Camporesia sambuci,Clematidis italica,Colletotrichum menispermi,C.quinquefoliae,Comoclathris pimpinellae,Crassiparies quadrisporus,Cytospora salicicola,Diatrype thailandica,Dothiorella rhamni,Durotheca macrostroma,Farasanispora avicenniae,Halorosellinia rhizophorae,Humicola koreana,Hypoxylon lilloi,Kirschsteiniothelia tectonae,Lindgomyces okinawaensis,Longiostiolum tectonae,Lophiostoma pseudoarmatisporum,Moelleriella phukhiaoensis,M.pongdueatensis,Mucoharknessia anthoxanthi,Multilocularia bambusae,Multiseptospora thysanolaenae,Neophaeocryptopus cytisi,Ocellularia arachchigei,O.ratnapurensis,Ochronectria thailandica,Ophiocordyceps karstii,Parameliola acaciae,P.dimocarpi,Parastagonospora cumpignensis,Pseudodidymosphaeria phlei,Polyplosphaeria thailandica,Pseudolachnella brevifusiformis,Psiloglonium macrosporum,Rhabdodiscus albodenticulatus,Rosellinia chiangmaiensis,Saccothecium rubi,Seimatosporium pseudocornii,S.pseudorosae,Sigarispora ononidis and Towyspora aestuari.New combinations are provided for Eutiarosporella dactylidis(sexual morph described and illus trated)and Pseudocamarosporium pini.Descriptions,illustrations and/or reference specimens are designated for Aposphaeria corallinolutea,Cryptovalsa ampelina,Dothiorella vidmadera,Ophiocordyceps formosana,Petrakia echinata,Phragmoporthe conformis and Pseudocamarosporium pini.The new species of Basidiomycota are Agaricus coccyginus,A.luteofibrillosus,Amanita atrobrunnea,A.digitosa,A.gleocystidiosa,A.pyriformis,A.strobilipes,Bondarzewia tibetica,Cortinarius albosericeus,C.badioflavidus,C.dentigratus,C.duboisensis,C.fragrantissimus,C.roseobasilis,C.vinaceobrunneus,C.vinaceogrisescens,C.wahkiacus,Cyanoboletus hymenoglutinosus,Fomitiporia atlantica,F.subtilissima,Ganoderma wuzhishanensis,Inonotus shoreicola,Lactifluus armeniacus,L.ramipilosus,Leccinum indoaurantiacum,Musumecia alpina,M.sardoa,Russula amethystina subp.tengii and R.wangii are introduced.Descriptions,illustrations,notes and/or reference specimens are designated for Clarkeinda trachodes,Dentocorticium ussuricum,Galzinia longibasidia,Lentinus stuppeus and Leptocorticium tenellum.The other new genera,species new combinations are Anaeromyces robustus,Neocallimastix californiae and Piromyces finnis from Neocallimastigomycota,Phytophthora estuarina,P.rhizophorae,Salispina,S.intermedia,S.lobata and S.spinosa from Oomycota,and Absidia stercoraria,Gongronella orasabula,Mortierella calciphila,Mucor caatinguensis,M.koreanus,M.merdicola and Rhizopus koreanus in Zygomycota.Guo Jie Li Kevin D.Hyde Rui Lin Zhao Sinang Hongsanan Faten Awad Abdel-Aziz Mohamed A.Abdel-Wahab Pablo Alvarado Genivaldo Alves-Silva Joseph F.Ammirati Hiran A.Ariyawansa Abhishek Baghela Ali Hassan Bahkali Michael Beug D.Jayarama Bhat Dimitar Bojantchev Thitiya Boonpratuang Timur S.Bulgakov Erio Camporesi Marcela CBoro Oldriska Ceska Dyutiparna Chakraborty Jia Jia Chen K.W.Thilini Chethana Putarak Chomnunti Giovanni Consiglio Bao Kai Cui Dong Qin Dai Yu Cheng Dai Dinushani A.Daranagama Kanad Das Monika C.Dayarathne Eske De Crop Rafael J.V.De Oliveira Carlos Alberto Fragoso de Souza JoséIde Souza Bryn T.M.Dentinger Asha J.Dissanayake Mingkwan Doilom E.Ricardo Drechsler-Santos Masoomeh Ghobad-Nejhad Sean P.Gilmore Aristóteles Góes-Neto MichałGorczak Charles H.Haitjema Kalani Kanchana Hapuarachchi Akira Hashimoto Mao Qiang He John K.Henske Kazuyuki Hirayama Maria J.Iribarren Subashini C.Jayasiri Ruvishika S.Jayawardena Sun Jeong Jeon Gustavo H.Jerônimo Ana L.Jesus E.B.Gareth Jones Ji Chuan Kang Samantha C.Karunarathna Paul M.Kirk Sirinapa Konta Eric Kuhnert Ewald Langer Haeng Sub Lee Hyang Burm Lee Wen Jing Li Xing Hong Li Kare Liimatainen Diogo Xavier Lima Chuan Gen Lin Jian Kui Liu Xings Zhong Liu Zuo Yi Liu J.Jennifer Luangsa-ard Robert Lücking H.Thorsten Lumbsch Saisamorn Lumyong Eduardo M.Leaño Agostina V.Marano Misato Matsumura Eric H.C.McKenzie Suchada Mongkolsamrit Peter E.Mortimer Thi Thuong Thuong Nguyen Tuula Niskanen Chada Norphanphoun Michelle A.O’Malley Sittiporn Parnmen Julia Pawłowska Rekhani H.Perera Rungtiwa Phookamsak Chayanard Phukhamsakda Carmen L.A.Pires-Zottarelli Olivier Raspé Mateus A.Reck Sarah C.O.Rocha AndréL.C.M.Ade Santiago Indunil C.Senanayake Ledo Setti Qiu Ju Shang Sanjay K.Singh Esteban B.Sir Kevin V.Solomon Jie Song Prasert Srikitikulchai Marc Stadler Satinee Suetrong Hayato Takahashi Takumasa Takahashi Kazuaki Tanaka Li Ping Tang Kasun M.Thambugala Donnaya Thanakitpipattana Michael K.Theodorou Benjarong Thongbai Tuksaporn Thummarukcharoen Qing Tian Saowaluck Tibpromma Annemieke Verbeken Alfredo Vizzini Josef Vlasák Kerstin Voigt Dhanushka N.Wanasinghe Yong Wang Gothamie Weerakoon Hua An Wen Ting Chi Wen Nalin N.Wijayawardene Sarunyou Wongkanoun Marta Wrzosek Yuan Pin Xiao Jian Chu Xu Ji Ye Yan Jing Yang Shu Da Yang Yu Hu Jin Feng Zhang Jie Zhao Li Wei Zhou Derek Peršoh Alan J.L.Phillips Sajeewa S.N.Maharachchikumbura 2016Fungal Diversity2016,,3:1
7Dothideales显示文摘The type specimens or representative specimens of the potentially dothidealean genera Bagnisiella,Botryochora,Coccostromella,Columnosphaeria,Delphinel la,Dictyodothis,Discosphaerina,Dothidea,Dothiora,Endodothiora,Jaffuela,Mycoporis,Omphalospora,Pachysacca,Plowrightia,Saccothecium,Stylodothis,Sydowia and Yoshinagaia were examined while,fresh specimens of Aureobasidium pullulans,Dothidea insculpta,Plowrightia ribesia and Saccothecium sepincola were made from Italy and Thailand.An introduction and the history of these genera,their family placement,morphology,and molecular phylogeny are provided.Morphology plus GenBank data are used to provide a systematic treatment of Dothideales.Phylogenetic analysis of LSU,SSU and ITS gene regions was carried out and in the resulting phylogenetic tree the taxa cluster in two clades with high bootstrap support.Clade A comprises Dothideaceae,the family type of Dothideales.The family Dothioraceae is not recognized as a distinct family and is synonymized under Dothideaceae.Neocylindroseptoria is introduced to accommodate Cylindroseptoria pistaciae as it forms a well-supported distinct clade in Dothideaceae.Clade B comprises Aureobasidium,Kabatiella,Pseudoseptoria,Saccothecium and Selenophoma species and Columnosphaeria fagi,for which we propose a new family,Aureobasidiaceae.The recently introduced Sydowia eucalypti also clustered within Clade B and therefore based on morphology and molecular phylogeny a new genus Pseudosydowia is introduced for Sydowia eucalypti.Celosporium laricicola is separated in a distinct clade,and therefore it is placed in Dothideales,genera,incertae sedis.The genera Bagnisiella,Botryochora,Coccostromella,Jaffuela,Lucidascocarpa,Mycoporis,Omphalospora,Pachysacca and Yoshinagaia are excluded from Dothideales and their placements are discussed.Kasun M.Thambugala Hiran A.Ariyawansa Yan-Mei Li Saranyaphat Boonmee Sinang Hongsanan Qing Tian Chonticha Singtripop D.Jayarama Bhat Erio Camporesi Ruvishika Jayawardena Zuo-Yi Liu Jian-Chu Xu Ekachai Chukeatirote Kevin D.Hyde 2014Fungal Diversity2014,,5:1
8Taxonomic and phylogenetic contributions to Celtis formosana,Ficus ampelas,F.septica,Macaranga tanarius and Morus australis leaf litter inhabiting microfungi显示文摘This article provides descriptions and illustrations of microfungi associated with the leaf litter of Celtis formosana,Ficus ampelas,F.septica,Macaranga tanarius and Morus australis collected from Taiwan.These host species are native to the island and Celtis formosana is an endemic tree species.The study revealed 95 species,consisting of two new families(Cylindrohyalosporaceae and Oblongohyalosporaceae),three new genera(Cylindrohyalospora,Neodictyosporium and Oblongohyalospora),41 new species and 54 new host records.The newly described species are Acrocalymma ampeli(Acrocalymmaceae),Arthrinium mori(Apiosporaceae),Arxiella celtidis(Muyocopronaceae),Bertiella fici(Melanommataceae),Cercophora fici(Lasiosphaeriaceae),Colletotrichum celtidis,C.fici,C.fici-septicae(Glomerellaceae),Conidiocarpus ficisepticae(Capnodiaceae),Coniella fici(Schizoparmaceae),Cylindrohyalospora fici(Cylindrohyalosporaceae),Diaporthe celtidis,D.fici-septicae(Diaporthaceae),Diaporthosporella macarangae(Diaporthosporellaceae),Diplodia fici-septicae(Botryosphaeriaceae),Discosia celtidis,D.fici(Sporocadaceae),Leptodiscella sexualis(Muyocopronaceae),Leptospora macarangae(Phaeosphaeriaceae),Memnoniella alishanensis,M.celtidis,M.mori(Stachybotryaceae),Micropeltis fici,M.ficina(Micropeltidaceae),Microthyrium fici-septicae(Microthyriaceae),Muyocopron celtidis,M.ficinum,Mycoleptodiscus alishanensis(Muyocopronaceae),Neoanthostomella fici(Xylariales genera incertae sedis),Neodictyosporium macarangae(Sordariales genera incertae sedis),Neofusicoccum moracearum(Botryosphaeriaceae),Neophyllachora fici(Phyllachoraceae),Nigrospora macarangae(Apiosporaceae),Oblongohyalospora macarangae(Oblongohyalosporaceae),Ophioceras ficinum(Ophioceraceae),Parawiesneriomyces chiayiensis(Wiesneriomycetaceae),Periconia alishanica,P.celtidis(Periconiaceae),Pseudocercospora fici-septicae(Mycosphaerellaceae),Pseudoneottiospora cannabacearum(Chaetosphaeriaceae)and Pseudopithomyces mori(Didymosphaeriaceae).The new host records are Alternaria burnsii,A.pseudoeichhorniae(Pleosporaceae),Arthrinium hydei,A.malaysianum,A.paraphaeospermum,A.rasikravindrae,A.sacchari(Apiosporaceae),Bartalinia robillardoides(Sporocadaceae),Beltrania rhombica(Beltraniaceae),Cladosporium tenuissimum(Cladosporiaceae),Coniella quercicola(Schizoparmaceae),Dematiocladium celtidicola(Nectriaceae),Diaporthe limonicola,D.millettiae,D.pseudophoenicicola(Diaporthaceae),Dictyocheirospora garethjonesii(Dictyosporiaceae),Dimorphiseta acuta(Stachybotryaceae),Dinemasporium parastrigosum(Chaetosphaeriaceae),Discosia querci(Sporocadaceae),Fitzroyomyces cyperacearum(Stictidaceae),Gilmaniella bambusae(Ascomycota genera incertae sedis),Hermatomyces biconisporus(Hermatomycetaceae),Lasiodiplodia thailandica,L.theobromae(Botryosphaeriaceae),Memnoniella echinata(Stachybotryaceae),Muyocopron dipterocarpi,M.lithocarpi(Muyocopronaceae),Neopestalotiopsis asiatica,N.phangngaensis(Sporocadaceae),Ophioceras chiangdaoense(Ophioceraceae),Periconia byssoides(Periconiaceae),Pestalotiopsis dracaenea,P.formosana,P.neolitseae,P.papuana,P.parva,P.portugallica,P.trachycarpicola(Sporocadaceae),Phragmocapnias betle(Capnodiaceae),Phyllosticta capitalensis(Phyllostictaceae),Pseudopestalotiopsis camelliae-sinensis(Sporocadaceae),Pseudopithomyces chartarum,P.sacchari(Didymosphaeriaceae),Pseudorobillarda phragmitis(Pseudorobillardaceae),Robillarda roystoneae(Sporocadaceae),Sirastachys castanedae,S.pandanicola(Stachybotryaceae),S pegazzinia musae(Didymosphaeriaceae),Stachybotrys aloeticola,S.microspora(Stachybotryaceae),Strigula multiformis(Strigulaceae),Torula fici(Torulaceae),Wiesneriomyces laurinus(Wiesneriomycetaceae)and Yunnanomyces pandanicola(Sympoventuriaceae).The taxonomic placement of most taxa discussed in this study is based on morphological observation of specimens,coupled with multi-locus phylogenetic analyses of sequence data.In addition,this study provides a host-fungus database for future studies and increases knowledge of fungal diversity,as well as new fungal discoveries from the island.Danushka S.Tennakoon Chang‑Hsin Kuo Sajeewa S.N.Maharachchikumbura Kasun M.Thambugala Eleni Gentekaki Alan J.L.Phillips D.Jayarama Bhat Dhanushka N.Wanasinghe Nimali Ide Silva Itthayakorn Promputtha Kevin D.Hyde 2021Fungal Diversity2021,,3:1
9Microfungi on Tectona grandis(teak)in Northern Thailand显示文摘To date there is virtually no information available concerning the fungi associated with Tectona grandis(teak)(Lamiaceae)in Thailand.In this study,samples of microfungi were collected from both asymptomatic stems and dead wood,and symptomatic branches,stem and leaves of T.grandisfrom 27 sites in six provinces(Chiang Mai,Chiang Rai,Phayao,Phitsanulok,Phrae and Uttaradit Provinces).Morphology and combined multi-gene phylogeny(CAL,GAPDH,ITS,LSU,RPB2,SSU,TEF1 and TUB)were used to identify taxa.A total of 270 collections,representing 28 fungal species residing in 12 families,7 orders and 21 genera,with three species of uncertain taxonomic placement were identified.Of these,one family,three genera and 14 species are new to science.The new family,Pseudocoleodictyosporaceae is introduced based on its distinct lineage in the Dothideomycetes and its unique morphology as compared to Roussoellaceae and Torulaceae.The new genera are Neooccultibambusa,Pseudocoleodictyospora and Subglobosporium.The newly described species are Diaporthe neoraonikayaporum,D.tectonendophytica,D.tectonae,D.tectonigena,Hermatomyces tectonae,H.thailandica,Manoharachariella tectonae,Neooccultibambusa chiangraiensis,Pseudocoleodictyospora sukhothaiensis,Ps.tectonae,Ps.thailandica,Rhytidhysteron tectonae,Subglobosporium tectonae and Tubeufia tectonae.Fourteen species are known published taxa including Alternaria tillandsiae,Berkleasmium talaumae,Boerlagiomyces macrospora,Ceratocladium purpureogriseum,Fusarium solani,Helicoma siamense,Lasiodiplodia theobromae,Macrovalsaria megalospora,Paradictyoarthrinium diffractum,Phaeoacremonium italicum,Sphaeropsis eucalypticola,Stachybotrys levispora,St.renispora and Thaxteriellopsis lignicola.Epitypifications or reference specimens are designated for Boerlagiomyces macrospora and Macrovalsaria megalospora.Macrovalsaria megalospora is transferred from Botryosphaeriaceae to Dothideomycetes genus,incertae sedis based on taxonomy and phylogenetic analysis,which indicate it is distinct from Botryosphaeriaceae.All fungal species represent first reports on T.grandisin Thailand.New taxa and taxa incertae sedis,as well as known taxa which are established as reference specimens or epitypes,are presented with phylogenetic tree analyses,habitat,known distribution,material examined,full descriptions,notes and figures.Information is also provided for known taxa to add to the body of knowledge and to assist those wishing to study fungi occurring on T.grandis in future.Mingkwan Doilom Asha J.Dissanayake Dhanushka N.Wanasinghe Saranyaphat Boonmee Jian-Kui Liu D.Jayarama Bhat Joanne E.Taylor Ali.H.Bahkali Eric H.C.McKenzie Kevin D.Hyde 2017Fungal Diversity2017,,1:1
10Families of Dothideomycetes显示文摘Dothideomycetes comprise a highly diverse range of fungi characterized mainly by asci with two wall layers(bitunicate asci)and often with fissitunicate dehiscence.Many species are saprobes,with many asexual states comprising important plant pathogens.They are also endophytes,epiphytes,fungicolous,lichenized,or lichenicolous fungi.They occur in terrestrial,freshwater and marine habitats in almost every part of the world.We accept 105 families in Dothideomycetes with the new families Anteagloniaceae,Bambusicolaceae,Biatriosporaceae,Lichenoconiaceae,Muyocopronaceae,Paranectriellaceae,Roussoellaceae,Salsugineaceae,Seynesiopeltidaceae and Thyridariaceae introduced in this paper.Each family is provided with a description and notes,including asexual and asexual states,and if more than one genus is included,the type genus is also characterized.Each family is provided with at least one figure-plate,usually illustrating the type genus,a list of accepted genera,including asexual genera,and a key to these genera.A phylogenetic tree based on four gene combined analysis add support for 64 of the families and 22 orders,including the novel orders,Dyfrolomycetales,Lichenoconiales,Lichenotheliales,Monoblastiales,Natipusillales,Phaeotrichales and Strigulales.The paper is expected to provide a working document on Dothideomycetes which can be modified as new data comes to light.It is hoped that by illustrating types we provide stimulation and interest so that more work is carried out in this remarkable group of fungi.Kevin D.Hyde E.B.Gareth Jones Jian-Kui Liu Hiran Ariyawansa Eric Boehm Saranyaphat Boonmee Uwe Braun Putarak Chomnunti Pedro W.Crous Dong-Qin Dai Paul Diederich Asha Dissanayake Mingkhuan Doilom Francesco Doveri Singang Hongsanan Ruvishika Jayawardena James D.Lawrey Yan-Mei Li Yong-Xiang Liu Robert Lücking Jutamart Monkai Lucia Muggia Matthew P.Nelsen Ka-Lai Pang Rungtiwa Phookamsak Indunil C.Senanayake Carol A.Shearer Satinee Suetrong Kazuaki Tanaka Kasun M.Thambugala Nalin N.Wijayawardene Saowanee Wikee Hai-Xia Wu Ying Zhang Begoña Aguirre-Hudson S.Aisyah Alias AndréAptroot Ali H.Bahkali Jose L.Bezerra D.Jayarama Bhat Erio Camporesi Ekachai Chukeatirote Cécile Gueidan David L.Hawksworth Kazuyuki Hirayama Sybren De Hoog Ji-Chuan Kang Kerry Knudsen Wen-Jing Li Xing-Hong Li Zou-Yi Liu Ausana Mapook Eric H.C.McKenzie Andrew N.Miller Peter E.Mortimer Alan J.L.Phillips Huzefa A.Raja Christian Scheuer Felix Schumm Joanne E.Taylor Qing Tian Saowaluck Tibpromma Dhanushka N.Wanasinghe Yong Wang Jian-Chu Xu Supalak Yacharoen Ji-Ye Yan Min Zhang 2013Fungal Diversity2013,,6:1
11Fungal diversity notes 603–708: taxonomic and phylogenetic notes on genera and species显示文摘This is the sixth in a series of papers where we bring collaborating mycologists together to produce a set of notes of several taxa of fungi.In this study we introduce a new family Fuscostagonosporaceae in Dothideomycetes.We also introduce the new ascomycete genera Acericola,Castellaniomyces,Dictyosporina and Longitudinalis and new species Acericola italica,Alternariaster trigonosporus,Amarenomyces dactylidis,Angustimassarina coryli,Astrocystis bambusicola,Castellaniomyces rosae,Chaetothyrina artocarpi,Chlamydotubeufia krabiensis,Colletotrichum lauri,Collodiscula chiangraiensis,Curvularia palmicola,Cytospora mali-sylvestris,Dictyocheirospora cheirospora,Dictyosporina ferruginea,Dothiora coronillae,Dothiora spartii,Dyfrolomyces phetchaburiensis,Epicoccum cedri,Epicoccum pruni,Fasciatispora calami,Fuscostagonospora cytisi,Grandibotrys hyalinus,Hermatomyces nabanheensis,Hongkongmyces thailandica,Hysterium rhizophorae,Jahnula guttulaspora,Kirschsteiniothelia rostrata,Koorchalomella salmonispora,Longitudinalis nabanheensis,Lophium zalerioides,Magnibotryascoma mali,Meliola clerodendri-infortunati,Microthyrium chinense,Neodidymelliopsis moricola,Neophaeocryptopus spartii,Nigrograna thymi,Ophiocordyceps cossidarum,Ophiocordyceps issidarum,Ophiosimulans plantaginis,Otidea pruinosa,Otidea stipitata,Paucispora kunmingense,Phaeoisaria microspora,Pleurothecium floriforme,Poaceascoma halophila,Periconia aquatica,Periconia submersa,Phaeosphaeria acaciae,Phaeopoacea muriformis,Pseudopithomyces kunmingnensis,Ramgea ozimecii,Sardiniella celtidis,Seimatosporium italicum,Setoseptoria scirpi,Torula gaodangensis and Vamsapriya breviconidiophora.We also provide an amended account of Rhytidhysteron to include apothecial ascomata and a J?hymenium.The type species of Ascotrichella hawksworthii(Xylariales genera incertae sedis),Biciliopsis leptogiicola(Sordariomycetes genera incertae sedis),Brooksia tropicalis(Micropeltidaceae),Bryochiton monascus(Teratosphaeriaceae),Bryomyces scapaniae(Pseudoperisporiaceae),Buelliella minimula(Dothideomycetes genera incertae sedis),Carinispora nypae(Pseudoastrosphaeriellaceae),Cocciscia hammeri(Verrucariaceae),Endoxylina astroidea(Diatrypaceae),Exserohilum turcicum(Pleosporaceae),Immotthia hypoxylon(Roussoellaceae),Licopolia franciscana(Vizellaceae),Murispora rubicunda(Amniculicolaceae)and Doratospora guianensis(synonymized under Rizalia guianensis,Trichosphaeriaceae)were reexamined and descriptions,illustrations and discussion on their familial placement are given based on phylogeny and morphological data.New host records or new country reports are provided for Chlamydotubeufia huaikangplaensis,Colletotrichum fioriniae,Diaporthe subclavata,Diatrypella vulgaris,Immersidiscosia eucalypti,Leptoxyphium glochidion,Stemphylium vesicarium,Tetraploa yakushimensis and Xepicula leucotricha.Diaporthe baccae is synonymized under Diaporthe rhusicola.A reference specimen is provided for Periconia minutissima.Updated phylogenetic trees are provided for most families and genera.We introduce the new basidiomycete species Agaricus purpurlesquameus,Agaricus rufusfibrillosus,Lactifluus holophyllus,Lactifluus luteolamellatus,Lactifluus pseudohygrophoroides,Russula benwooii,Russula hypofragilis,Russula obscurozelleri,Russula parapallens,Russula phoenicea,Russula pseudopelargonia,Russula pseudotsugarum,Russula rhodocephala,Russula salishensis,Steccherinum amapaense,Tephrocybella constrictospora,Tyromyces amazonicus and Tyromyces angulatus and provide updated trees to the genera.We also introduce Mortierella formicae in Mortierellales,Mucoromycota and provide an updated phylogenetic tree.Kevin D.Hyde Chada Norphanphoun Vanessa P.Abreu Anna Bazzicalupo K.W.Thilini Chethana Marco Clericuzio Monika C.Dayarathne Asha J.Dissanayake Anusha H.Ekanayaka Mao-Qiang He Sinang Hongsanan Shi-Ke Huang Subashini C.Jayasiri Ruvishika S.Jayawardena Anuruddha Karunarathna Sirinapa Konta Ivana Kusan Hyun Lee Junfu Li Chuan-Gen Lin Ning-Guo Liu Yong-Zhong Lu Zong-Long Luo Ishara S.Manawasinghe Ausana Mapook Rekhani H.Perera Rungtiwa Phookamsak Chayanard Phukhamsakda Igor Siedlecki Adriene Mayra Soares Danushka S.Tennakoon Qing Tian Saowaluck Tibpromma Dhanushka N.Wanasinghe Yuan-Pin Xiao Jing Yang Xiang-Yu Zeng Faten A.Abdel-Aziz Wen-Jing Li Indunil C.Senanayake Qiu-Ju Shang Dinushani A.Daranagama Nimali Ide Silva Kasun M.Thambugala Mohamed A.Abdel-Wahab Ali H.Bahkali Mary L.Berbee Saranyaphat Boonmee D.Jayarama Bhat Timur S.Bulgakov Bart Buyck Erio Camporesi Rafael F.Castaneda-Ruiz Putarak Chomnunti Minkwan Doilom Francesco Dovana Tatiana B.Gibertoni Margita Jadan Rajesh Jeewon E.B.Gareth Jones Ji-Chuan Kang Samantha C.Karunarathna Young Woon Lim Jian-Kui Liu Zuo-Yi Liu Helio Longoni Plautz Jr Saisamorn Lumyong Sajeewa S.N.Maharachchikumbura Neven Matocec Eric H.C.McKenzie Armin Mesic Daniel Miller Julia Pawłowska Olinto L.Pereira Itthayakorn Promputtha Andrea I.Romero Leif Ryvarden Hong-Yan Su Satinee Suetrong Zdenko Tkalcec Alfredo Vizzini Ting-Chi Wen Komsit Wisitrassameewong Marta Wrzosek Jian-Chu Xu Qi Zhao Rui-Lin Zhao Peter E.Mortimer 2017Fungal Diversity2017,,6:0
12Towards a natural classification of Annulatascaceae-like taxa:introducing Atractosporales ord.nov.and six new families显示文摘Species with relatively small,membraneous,black ascomata,with or without long necks,unitunicate,cylindrical asci with apical rings and fusiform,hyaline ascospores with or without mucilaginous sheaths are common in freshwater habitats in tropical and temperate regions.Many of these taxa have originally been recorded as Annulatascaceae-like taxa.Twenty genera have been included in the family Annulatascaceae,mostly based on morphological characters,while molecular work and phylogenetic analyses are lacking for many genera.In this study,nine new Annulatascaceae-like taxa collected from Thailand were morphologically examined.Pure cultures obtained from single ascospores were used in molecular studies.The nine new strains and several other strains of Annulatascaceae-like Sordariomycetes species were used to establish phylogenetic and evolution relationships among the taxa,based on combined LSU,SSU,ITS and RPB2 sequence data.Phylogenetic analyses provide evidence to introduce one new order and six new families,to accommodate taxa excluded from Annulatascaceae sensu stricto.A new order Atractosporales is established based on the molecular study,including three new introduced families Conlariaceae,Pseudoproboscisporaceae and Atractosporaceae.Conlariaceae is introduced for the genus Conlarium which comprises two species,Conlarium duplumascosporun and a new Hyphomycetous asexual morph taxon Conlarium aquaticum which has subglobose or irregular,brown,clathrate,muriform conidia.Pseudoproboscisporaceae includes Pseudoproboscispora and Diluviicola,while Atractosporaceae includes the genera Rubellisphaeria and Atractospora.Barbatosphaeria,Xylomelasma and Ceratostomella form a distinct stable lineage which is introduced as a new family Barbatosphaeriaceae in Diaporthomycetidae families incertae sedis.A new family Lentomitellaceae is introduced in Diaporthomycetidae families incertae sedis,to accommodate the genus Lentomitella.Woswasiaceae is introduced to accommodate Woswasia,Xylochrysis and Cyanoannulus in Diaporthomycetidae families incertae sedis.Three new species of Fluminicola viz.F.saprophytica,F.thailandensis and F.aquatica are introduced.A new sexual morph,Dictyosporella thailandensis,is reported and Dictyosporella is excluded from Annulatascaceae and placed in Diaporthomycetidae genera incertae sedis.The first sexual morph of Sporidesmium,S.thailandense is also described.The new species Atractospora thailandensis,Diluviicola aquatica and Pseudoproboscispora thailandensis are also introduced.Platytrachelon is added to Papulosaceae based on phylogenetic analysis and morphological characters.Aquaticola,Fusoidispora and Pseudoannulatascus are excluded from Annulatascaceae and placed in Diaporthomycetidae genera incertae sedis.Mirannulata is accommodated in Sordariomycetes,genera incertae sedis.Huang Zhang Wei Dong Kevin D.Hyde Sajeewa S.N.Maharachchikumbura Sinang Hongsanan D.Jayarama Bhat Abdullah M.Al-Sadi Di Zhang 2017Fungal Diversity2017,,4:0
13Fungal diversity notes 491–602: taxonomic and phylogenetic contributions to fungal taxa显示文摘This is a continuity of a series of taxonomic and phylogenetic papers on the fungi where materials were collected from many countries,examined and described.In addition to extensive morphological descriptions and appropriate asexual and sexual connections,DNA sequence data are also analysed from concatenated datasets to infer phylogenetic relationships and substantiate systematic positions of taxa within appropriate ranks.Wherever new species or combinations are proposed,we apply an integrative approach using morphological and molecular data as well as ecological features wherever applicable.Notes on 112 fungal taxa are compiled in this paper including Biatriosporaceae and Roussoellaceae,Didysimulans gen.nov.,81 new species,18 new host records and new country records,five reference specimens,two new combinations,and three sexual and asexual morph reports.The new species are Amanita cornelii,A.emodotrygon,Angustimassarina alni,A.arezzoensis,A.italica,A.lonicerae,A.premilcurensis,Ascochyta italica,A.rosae,Austroboletus appendiculatus,Barriopsis thailandica,Berkleasmium ariense,Calophoma petasitis,Camarosporium laburnicola,C.moricola,C.grisea,C.ossea,C.paraincrustata,Colletotrichum sambucicola,Coprinopsis cerkezii,Cytospora gelida,Dacrymyces chiangraiensis,Didysimulans italica,D.mezzanensis,Entodesmium italica,Entoloma magnum,Evlachovaea indica,Exophiala italica,Favolus gracilisporus,Femsjonia monospora,Fomitopsis flabellata,F.roseoalba,Gongronella brasiliensis,Helvella crispoides,Hermatomyces chiangmaiensis,H.chromolaenae,Hysterium centramurum,Inflatispora caryotae,Inocybe brunneosquamulosa,I.luteobrunnea,I.rubrobrunnea,Keissleriella cirsii,Lepiota cylindrocystidia,L.flavocarpa,L.maerimensis,Lophiotrema guttulata,Marasmius luculentus,Morenoina calamicola,Moelleriella thanathonensis,Mucor stercorarius,Myrmecridium fluviae,Myrothecium septentrionale,Neosetophoma garethjonesii,Nigrograna cangshanensis,Nodulosphaeria guttulatum,N.multiseptata,N.sambuci,Panus subfasciatus,Paraleptosphaeria padi,Paraphaeosphaeria viciae,Parathyridaria robiniae,Penicillium punicae,Phaeosphaeria calamicola,Phaeosphaeriopsis yuccae,Pleurophoma italica,Polyporus brevibasidiosus,P.koreanus,P.orientivarius,P.parvovarius,P.subdictyopus,P.ulleungus,Pseudoasteromassaria spadicea,Rosellinia mearnsii,Rubroboletus demonensis,Russula yanheensis,Sigarispora muriformis,Sillia italica,Stagonosporopsis ailanthicola,Strobilomyces longistipitatus,Subplenodomus galicola and Wolfiporia pseudococos.The new combinations are Melanomma populina and Rubroboletus eastwoodiae.The reference specimens are Cookeina tricholoma,Gnomoniopsis sanguisorbae,Helvella costifera,Polythrincium trifolii and Russula virescens.The new host records and country records are Ascochyta medicaginicola,Boletellus emodensis,Cyptotrama asprata,Cytospora ceratosperma,Favolaschia auriscalpium,F.manipularis,Hysterobrevium mori,Lentinus sajor-caju,L.squarrosulus,L.velutinus,Leucocoprinus cretaceus,Lophiotrema vagabundum,Nothophoma quercina,Platystomum rosae,Pseudodidymosphaeria phlei,Tremella fuciformis,Truncatella spartii and Vaginatispora appendiculata and three sexual and asexual morphs are Aposphaeria corallinolutea, Dothiorabuxi and Hypocrella calendulina.Saowaluck Tibpromma Kevin D.Hyde Rajesh Jeewon Sajeewa S.N.Maharachchikumbura Jian-Kui Liu D.Jayarama Bhat E.B.Gareth Jones Eric H.C.McKenzie Erio Camporesi Timur S.Bulgakov Mingkwan Doilom AndreLuiz Cabral Monteiro de Azevedo Santiago Kanad Das Patinjareveettil Manimohan Tatiana B.Gibertoni Young Woon Lim Anusha Hasini Ekanayaka Benjarong Thongbai Hyang Burm Lee Jun-Bo Yang Paul M.Kirk Phongeun Sysouphanthong Sanjay K.Singh Saranyaphat Boonmee Wei Dong K.N.Anil Raj K.P.Deepna Latha Rungtiwa Phookamsak Chayanard Phukhamsakda Sirinapa Konta Subashini C.Jayasiri Chada Norphanphoun Danushka S.Tennakoon Junfu Li Monika C.Dayarathne Rekhani H.Perera Yuanpin Xiao Dhanushka N.Wanasinghe Indunil C.Senanayake Ishani D.Goonasekara N.Ide Silva Ausana Mapook Ruvishika S.Jayawardena Asha J.Dissanayake Ishara S.Manawasinghe K.W.Thilini Chethana Zong-Long Luo Kalani Kanchana Hapuarachchi Abhishek Baghela Adriene Mayra Soares Alfredo Vizzini Angelina Meiras-Ottoni Armin Mesic Arun Kumar Dutta Carlos Alberto Fragoso de Souza Christian Richter Chuan-Gen Lin Debasis Chakrabarty Dinushani A.Daranagama Diogo Xavier Lima Dyutiparna Chakraborty Enrico Ercole Fang Wu Giampaolo Simonini Gianrico Vasquez Gladstone Alves da Silva Helio Longoni Plautz Jr Hiran A.Ariyawansa Hyun Lee Ivana Kusan Jie Song Jingzu Sun Joydeep Karmakar Kaifeng Hu Kamal C.Semwal Kasun M.Thambugala Kerstin Voigt Krishnendu Acharya Kunhiraman C.Rajeshkumar Leif Ryvarden Margita Jadan MdIqbal Hosen Michal Miksık Milan C.Samarakoon Nalin N.Wijayawardene Nam Kyu Kim Neven Matocec Paras Nath Singh Qing Tian R.P.Bhatt Rafael JoseVilela de Oliveira Rodham E.Tulloss S.Aamir Saithong Kaewchai Sayali D.Marathe Sehroon Khan Sinang Hongsanan Sinchan Adhikari Tahir Mehmood Tapas Kumar Bandyopadhyay Tatyana YuSvetasheva Thi Thuong Thuong Nguyen Vladimır Antonın Wen-Jing Li Yong Wang Yuvraj Indoliya Zdenko Tkalcec Abdallah M.Elgorban Ali H.Bahkali Alvin M.C.Tang Hong-Yan Su Huang Zhang Itthayakorn Promputtha Jennifer Luangsa-ard Jianchu Xu Jiye Yan Kang Ji-Chuan Marc Stadler Peter E.Mortimer Putarak Chomnunti Qi Zhao Alan J.L.Phillips Sureeporn Nontachaiyapoom Ting-Chi Wen Samantha C.Karunarathna 2017Fungal Diversity2017,,2:0
14Microfungi associated with Clematis(Ranunculaceae)with an integrated approach to delimiting species boundaries显示文摘The cosmopolitan plant genus Clematis contains many climbing species that can be found worldwide.The genus occurs in the wild and is grown commercially for horticulture.Microfungi on Clematis were collected from Belgium,China,Italy,Thailand and the UK.They are characterized by morphology and analyses of gene sequence data using an integrated species concept to validate identifications.The study revealed two new families,12 new genera,50 new species,26 new host records with one dimorphic character report,and ten species are transferred to other genera.The new families revealed by multigene phylogeny are Longiostiolaceae and Pseudomassarinaceae in Pleosporales(Dothideomycetes).New genera are Anthodidymella(Didymellaceae),Anthosulcatispora and Parasulcatispora(Sulcatisporaceae),Fusiformispora(Amniculicolaceae),Longispora(Phaeosphaeriaceae),Neobyssosphaeria(Melanommataceae),Neoleptosporella(Chaetosphaeriales,genera incertae sedis),Neostictis(Stictidaceae),Pseudohelminthosporium(Neomassarinaceae),Pseudomassarina(Pseudomassarinaceae),Sclerenchymomyces(Leptosphaeriaceae)and Xenoplectosphaerella(Plectosphaerellaceae).The newly described species are Alloleptosphaeria clematidis,Anthodidymella ranunculacearum,Anthosulcatispora subglobosa,Aquadictyospora clematidis,Brunneofusispora clematidis,Chaetosphaeronema clematidicola,C.clematidis,Chromolaenicola clematidis,Diaporthe clematidina,Dictyocheirospora clematidis,Distoseptispora clematidis,Floricola clematidis,Fusiformispora clematidis,Hermatomyces clematidis,Leptospora clematidis,Longispora clematidis,Massariosphaeria clematidis,Melomastia clematidis,M.fulvicomae,Neobyssosphaeria clematidis,Neoleptosporella clematidis,Neoroussoella clematidis,N.fulvicomae,Neostictis nigricans,Neovaginatispora clematidis,Parasulcatispora clematidis,Parathyridaria clematidis,P.serratifoliae,P.virginianae,Periconia verrucose,Phomatospora uniseriata,Pleopunctum clematidis,Pseudocapulatispora clematidis,Pseudocoleophoma clematidis,Pseudohelminthosporium clematidis,Pseudolophiostoma chiangraiense,P.clematidis,Pseudomassarina clematidis,Ramusculicola clematidis,Sarocladium clematidis,Sclerenchymomyces clematidis,Sigarispora clematidicola,S.clematidis,S.montanae,Sordaria clematidis,Stemphylium clematidis,Wojnowiciella clematidis,Xenodidymella clematidis,Xenomassariosphaeria clematidis and Xenoplectosphaerella clematidis.The following fungi are recorded on Clematis species for the first time:Angustimassarina rosarum,Dendryphion europaeum,Dermatiopleospora mariae,Diaporthe ravennica,D.rudis,Dichotomopilus ramosissimum,Dictyocheirospora xishuangbannaensis,Didymosphaeria rubi-ulmifolii,Fitzroyomyces cyperacearum,Fusarium celtidicola,Leptospora thailandica,Memnoniella oblongispora,Neodidymelliopsis longicolla,Neoeutypella baoshanensis,Neoroussoella heveae,Nigrograna chromolaenae,N.obliqua,Pestalotiopsis verruculosa,Pseudoberkleasmium chiangmaiense,Pseudoophiobolus rosae,Pseudoroussoella chromolaenae,P.elaeicola,Ramusculicola thailandica,Stemphylium vesicarium and Torula chromolaenae.The new combinations are Anthodidymella clematidis(≡Didymella clematidis),A.vitalbina(≡Didymella vitalbina),Anthosulcatispora brunnea(≡Neobambusicola brunnea),Fuscohypha kunmingensis(≡Plectosphaerella kunmingensis),Magnibotryascoma rubriostiolata(≡Teichospora rubriostiolata),Pararoussoella mangrovei(≡Roussoella mangrovei),Pseudoneoconiothyrium euonymi(≡Roussoella euonymi),Sclerenchymomyces jonesii(≡Neoleptosphaeria jonesii),Stemphylium rosae(≡Pleospora rosae),and S.rosae-caninae(≡Pleospora rosae-caninae).The microfungi on Clematis is distributed in several classes of Ascomycota.The analyses are based on morphological examination of specimens,coupled with phylogenetic sequence data.To the best of our knowledge,the consolidated species concept approach is recommended in validating species.Chayanard Phukhamsakda Eric H.C.McKenzie Alan J.L.Phillips E.B.Gareth Jones D.Jayarama Bhat Stadler Marc Chitrabhanu S.Bhunjun Dhanushka N.Wanasinghe Benjarong Thongbai Erio Camporesi Damien Ertz Ruvishika S.Jayawardena Rekhani Hansika Perera Anusha H.Ekanayake Saowaluck Tibpromma Mingkwan Doilom Jianchu Xu Kevin D.Hyde 2020Fungal Diversity2020,,3:0
15Taxonomic and phylogenetic contributions to fungi associated with the invasive weed Chromolaena odorata (Siam weed)显示文摘This article provides morphological descriptions and illustrations of microfungi associated with the invasive weed,Chro-molaena odorata,which were mainly collected in northern Thailand.Seventy-seven taxa distributed in ten orders,23 families(of which Neomassarinaceae is new),12 new genera(Chromolaenicola,Chromolaenomyces,Longiappendispora,Pseudocapulatispora,Murichromolaenicola,Neoophiobolus,Paraleptospora,Pseudoroussoella,Pseudostaurosphaeria,Pseudothyridariella,Setoarthopyrenia,Xenoroussoella),47 new species(Aplosporella chromolaenae,Arthrinium chromolae-nae,Chromolaenicola chiangraiensis,C.lampangensis,C.nanensis,C.thailandensis,Chromolaenomyces appendiculatus,Diaporthe chromolaenae,Didymella chromolaenae,Dyfrolomyces chromolaenae,Leptospora chromolaenae,L.phraeana,Longiappendispora chromolaenae,Memnoniella chromolaenae,Montagnula chiangraiensis,M.chromolaenae,M.chromo-laenicola,M.thailandica,Murichromolaenicola chiangraiensis,M.chromolaenae,Muyocopron chromolaenae,M.chromo-laenicola,Neomassarina chromolaenae,Neoophiobolus chromolaenae,Neopyrenochaeta chiangraiensis,N.chromolaenae,N.thailandica,N.triseptatispora,Nigrograna chromolaenae,Nothophoma chromolaenae,Paraleptospora chromolaenae,P.chromolaenicola,Patellaria chromolaenae,Pseudocapulatispora longiappendiculata,Pseudoroussoella chromolaenae,Pseudostaurosphaeria chromolaenae,P.chromolaenicola,Pseudothyridariella chromolaenae,Pyrenochaetopsis chromolae-nae,Rhytidhysteron chromolaenae,Setoarthopyrenia chromolaenae,Sphaeropsis chromolaenicola,Tremateia chiangraiensis,T.chromolaenae,T.thailandensis,Xenoroussoella triseptata,Yunnanensis chromolaenae),12 new host records,three new taxonomic combinations(Chromolaenicola siamensis,Pseudoroussoella elaeicola,Pseudothyridariella mahakashae),and two reference specimens(Torula chromolaenae,T.fici)are described and illustrated.Unlike some other hosts,e.g.bamboo(Poaceae)and Pandanaceae,the dominant group of fungi on Siam weed were Dothideomycetes.Only 15 species previously recorded from northern Thailand were found in this study.Most of the taxa are likely to have jumped hosts from surrounding plants and are unlikely to be a specialist to Siam weed.Most fungal families found on Siam weed had divergence estimates with stem ages in the Cretaceous,which coincided with the expected origin of the host family(Asteraceae).This further indicates that the species have jumped hosts,as it is unlikely that the taxa on the alien Siam weed came from the Americas with its host.They may,however,have jumped from other Asteraceae hosts.In a preliminary screening 40(65%)of the 62 species tested showed antimicrobial activity and thus,the fungi associated with C.odorata may be promising sources of novel bioactive compound discovery.We provide a checklist of fungi associated with C.odorata based on the USDA Systematic Mycology and Microbiology Laboratory(SMML)database,relevant literature and our study.In total,130 taxa(116 identified and 14 unidentified species)are distributed in 20 orders,48 families and 85 genera.Pseudocercospora is the most commonly encountered genus on Siam weed.Ausana Mapook Kevin D.Hyde Eric H.C.McKenzie E.B.Gareth Jones D.Jayarama Bhat Rajesh Jeewon Marc Stadler Milan C.Samarakoon Maitree Malaithong Benjawan Tanunchai François Buscot Tesfaye Wubet Witoon Purahong 2020Fungal Diversity2020,,2:0
16Taxonomy and phylogeny of hyaline‑spored coelomycetes显示文摘Coelomycete is a general term used for asexual fungi which produce conidia in fruiting bodies:pycnidial,acervular,cupulate,pycnothyria or stromatic conidiomata.The group contains numerous plant pathogenic,saprobic and endophytic species associated with a wide range of hosts.Traditionally,morphological characters and host associations have been used as criteria to identify and classify coelomycetes,and this has resulted in a poor understanding of their generic and species boundaries.DNA based taxonomic studies have provided a better outlook of the phylogenetic and evolutionary trends in coelomycetes.However,the present outcomes represent only a preliminary step towards the understanding of coelomycetes.Many genera have not been revisited since they were first described.The present study revises the classification of the hyaline-spored coelomycetes and provides a modern taxonomic framework based on both morphology and phylogeny.In total,248 genera were investigated,of which less than 100 are known to have sequence data.Multi-locus sequence data analyses of 28S nrDNA,18S nrDNA,ITS,RNA polymerase II second largest subunit(rpb2),and part of the translation elongation factor 1-alpha gene(tef1)andβ-tubulin(tub2)gene regions were analysed.As a result,three new genera and 23 new species are introduced.In addition,three new links between sexual and asexual genera are provided.There are 138 genera that lack sequence data,and these are treated as Ascomycota,genera incertae sedis.Line drawings and descriptions are provided based on the examination of types and fresh collections and on the literature.Wen‑Jing Li Eric H.C.McKenzie Jian‑Kui(Jack)Liu D.Jayarama Bhat Dong‑Qin Dai Erio Camporesi Qing Tian Sajeewa S.N.Maharachchikumbura Zong‑Long Luo Qiu‑Ju Shang Jin‑Feng Zhang Narumon Tangthirasunun Samantha C.Karunarathna Jian‑Chu Xu Kevin D.Hyde 2020Fungal Diversity2020,,1:0
17Fungal diversity notes 929-1035:taxonomic and phylogenetic contributions on genera and species of fungi显示文摘This article is the ninth in the series of Fungal Diversity Notes,where 107 taxa distributed in three phyla,nine classes,31 orders and 57 families are described and illustrated.Taxa described in the present study include 12 new genera,74 new species,three new combinations,two reference specimens,a re-circumscription of the epitype,and 15 records of sexualasexual morph connections,new hosts and new geographical distributions.Twelve new genera comprise Brunneofusispora,Brunneomurispora,Liua,Lonicericola,Neoeutypella,Paratrimmatostroma,Parazalerion,Proliferophorum,Pseudoastrosphaeriellopsis,Septomelanconiella,Velebitea and Vicosamyces.Seventy-four new species are Agaricus memnonius,A.langensis,Aleurodiscus patagonicus,Amanita flavoalba,A.subtropicana,Amphisphaeria mangrovei,Baorangia major,Bartalinia kunmingensis,Brunneofusispora sinensis,Brunneomurispora lonicerae,Capronia camelliaeyunnanensis,Clavulina thindii,Coniochaeta simbalensis,Conlarium thailandense,Coprinus trigonosporus,Liua muriformis,Cyphellophora filicis,Cytospora ulmicola,Dacrymyces invisibilis,Dictyocheirospora metroxylonis,Distoseptispora thysanolaenae,Emericellopsis koreana,Galiicola baoshanensis,Hygrocybe lucida,Hypoxylon teeravasati,Hyweljonesia indica,Keissleriella caraganae,Lactarius olivaceopallidus,Lactifluus midnapurensis,Lembosia brigadeirensis,Leptosphaeria urticae,Lonicericola hyaloseptispora,Lophiotrema mucilaginosis,Marasmiellus bicoloripes,Marasmius indojasminodorus,Micropeltis phetchaburiensis,Mucor orantomantidis,Murilentithecium lonicerae,Neobambusicola brunnea,Neoeutypella baoshanensis,Neoroussoella heveae,Neosetophoma lonicerae,Ophiobolus malleolus,Parabambusicola thysanolaenae,Paratrimmatostroma kunmingensis,Parazalerion indica,Penicillium dokdoense,Peroneutypa mangrovei,Phaeosphaeria cycadis,Phanerochaete australosanguinea,Plectosphaerella kunmingensis,Plenodomus artemisiae,P.lijiangensis,Proliferophorum thailandicum,Pseudoastrosphaeriellopsis kaveriana,Pseudohelicomyces menglunicus,Pseudoplagiostoma mangiferae,Robillarda mangiferae,Roussoella elaeicola,Russula choptae,R.uttarakhandia,Septomelanconiella thailandica,Spencermartinsia acericola,Sphaerellopsis isthmospora,Thozetella lithocarpi,Trechispora echinospora,Tremellochaete atlantica,Trichoderma koreanum,T.pinicola,T.rugulosum,Velebitea chrysotexta,Vicosamyces venturisporus,Wojnowiciella kunmingensis and Zopfiella indica.Three new combinations are Baorangia rufomaculata,Lanmaoa pallidorosea and Wojnowiciella rosicola.The reference specimens of Canalisporium kenyense and Tamsiniella labiosa are designated.The epitype of Sarcopeziza sicula is re-circumscribed based on cyto-and histochemical analyses.The sexual-asexual morph connection of Plenodomus sinensis is reported from ferns and Cirsium for the first time.In addition,the new host records and country records are Amanita altipes,A.melleialba,Amarenomyces dactylidis,Chaetosphaeria panamensis,Coniella vitis,Coprinopsis kubickae,Dothiorella sarmentorum,Leptobacillium leptobactrum var.calidus,Muyocopron lithocarpi,Neoroussoella solani,Periconia cortaderiae,Phragmocamarosporium hederae,Sphaerellopsis paraphysata and Sphaeropsis eucalypticola.Rungtiwa Phookamsak Kevin D.Hyde Rajesh Jeewon D.Jayarama Bhat E.B.Gareth Jones Sajeewa S.N.Maharachchikumbura Olivier Raspe Samantha C.Karunarathna Dhanushka N.Wanasinghe Sinang Hongsanan Mingkwan Doilom Danushka S.Tennakoon Alexandre R.Machado Andre L.Firmino Aniket Ghosh Anuruddha Karunarathna Armin Mesic Arun Kumar Dutta Benjarong Thongbai Bandarupalli Devadatha Chada Norphanphoun Chanokned Senwanna Deping Wei Dhandevi Pem Frank Kwekucher Ackah Gen-Nuo Wang Hong-Bo Jiang Hugo Madrid Hyang Burm Lee Ishani D.Goonasekara Ishara S.Manawasinghe Ivana Kusan Josep Cano Josepa Gene Junfu Li Kanad Das Krishnendu Acharya K.N.Anil Raj K.P.Deepna Latha K.W.Thilini Chethana Mao-Qiang He Margarita Duenas Margita Jadan Maria P.Martin Milan C.Samarakoon Monika C.Dayarathne Mubashar Raza Myung Soo Park M.Teresa Telleria Napalai Chaiwan Neven Matocec Nimali Ide Silva Olinto L.Pereira Paras Nath Singh Patinjareveettil Manimohan Priyanka Uniyal Qiu-Ju Shang Rajendra P.Bhatt Rekhani H.Perera Renato Lucio Mendes Alvarenga Sandra Nogal-Prata Sanjay K.Singh Santhiti Vadthanarat Seung-Yoon Oh Shi-Ke Huang Shiwali Rana Sirinapa Konta Soumitra Paloi Subashini C.Jayasiri Sun Jeong Jeon Tahir Mehmood Tatiana Baptista Gibertoni Thuong T.T.Nguyen Upendra Singh Vinodhini Thiyagaraja V.Venkateswara Sarma Wei Dong Xian-Dong Yu Yong-Zhong Lu Young Woon Lim Yun Chen Zdenko Tkalcec Zhi-Feng Zhang Zong-Long Luo Dinushani A.Daranagama Kasun M.Thambugala Saowaluck Tibpromma Erio Camporesi Timur S.Bulgakov Asha J.Dissanayake Indunil C.Senanayake Dong Qin Dai Li-Zhou Tang Sehroon Khan Huang Zhang Itthayakorn Promputtha Lei Cai Putarak Chomnunti Rui-Lin Zhao Saisamorn Lumyong Saranyaphat Boonmee Ting-Chi Wen Peter E.Mortimer Jianchu Xu 2019Fungal Diversity2019,,2:0
18Taxonomy and phylogeny of dematiaceous coelomycetes显示文摘t Coelomycetous fungi are an artificial taxonomic group which produce conidia inside a cavity i.e.conidiomata.Coelomycetes comprise about,1000 genera and 7000 species,which can be endophytic,pathogenic or saprobic.Traditional classification of coelomycetes was previously based on morphology,such as the shape of conidiomata and mode of conidiogenesis,while it was treated as a distinct group i.e.Deuteromycotina.Sequence based taxonomic studies has been used to accommodate asexual fungi in a natural classification system,resolve generic boundaries of polyphyletic genera and species complexes,as well as establish asexual-sexual links.Nevertheless,most of genera lack sequence data,thus,morphology based identification is still important when introducing new genera or species.In this paper we illustrate,describe,and provide taxonomic notes for 235 dematiaceous coelomycetous genera,including five new genera viz.Apiculospora,Didymellocamarosporium,Melanocamarosporium,Melnikia and Paulkirkia.Phylogenetic analyses of combined sequence data are provided to show placements of dematiaceous coelomycetes in Dothideomycetes,Leotiomycetes and Sordariomycetes.One-hundred and fifty-two(65%)of genera have sequence data,thus,their taxonomic placement in a natural classification system,is listed as an outline.However,83 genera still lack sequence data,hence,they are treated as Ascomycota,genera incertae sedis.In addition,separate analyses are provided where better taxonomic resolution is needed.Nalin N.Wijayawardene Kevin D.Hyde Dhanushka N.Wanasinghe Moslem Papizadeh Ishani D.Goonasekara Erio Camporesi D.Jayarama Bhat Eric H.C.McKenzie Alan J.L.Phillips Paul Diederich Kazuaki Tanaka Wen Jing Li Narumon Tangthirasunun Rungtiwa Phookamsak Dong-Qin Dai Asha J.Dissanayake Gothamie Weerakoon Sajeewa S.N.Maharachchikumbura Akira Hashimoto Misato Matsumura Ali HBahkali Yong Wang 2016Fungal Diversity2016,,2:0
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