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| 1 | Comprehensive cytological characterization of the Gossypium hirsutum genome based on the development of a set of chromosome cytological markers显示文摘Cotton is the world's most important natural fiber crop. It is also a model system for studying polyploidization, genomic organization, and genome-size variation. Integrating the cytological characterization of cotton with its genetic map will be essential for understanding its genome structure and evolution, as well as for performing further genetic-map based mapping and cloning. In this study, we isolated a complete set of bacterial artificial chromosome clones anchored to each of the 52 chromosome arms of the tetraploid cotton Gossypium hirsutum. Combining these with telomere and centromere markers, we constructed a standard karyotype for the G. hirsutum inbred line TM-1. We dissected the chromosome arm localizations of the 45 S and 5S r DNA and suggest a centromere repositioning event in the homoeologous chromosomes AT09 and DT09. By integrating a systematic karyotype analysis with the genetic linkage map, we observed different genome sizes and chromosomal structures between the subgenomes of the tetraploid cotton and those of its diploid ancestors. Using evidence of conserved coding sequences, we suggest that the different evolutionary paths of non-coding retrotransposons account for most of the variation in size between the subgenomes of tetraploid cotton and its diploid ancestors. These results provide insights into the cotton genome and will facilitate further genome studies in G. hirsutum. | Wenbo Shan Yanqin Jiang Jinlei Han Kai Wang | 2016 | The Crop Journal2016，4，4： | 1 |
| 2 | Optimization of protoplast isolation,transformation and its application in sugarcane (Saccharum spontaneum L.)显示文摘Sugarcane is a prominent source of sugar and ethanol production.Genetic analysis for trait improvement of sugarcane is greatly hindered by its complex genome,long breeding cycle,and recalcitrance to genetic transformation.The protoplast-based transient transformation system is a versatile and convenient tool for in vivo functional gene analysis;however,quick and effective transformation systems are still lacking for sugarcane.Here,we developed an efficient protoplast-based transformation system by optimizing conditions of protoplasts isolation and PEG-mediated transformation in S.spontaneum.The yield of viable protoplasts was approximately 1.26×107 per gram of leaf material,and the transformation efficiency of 80.19%could be achieved under the optimized condition.Furthermore,using this approach,the nuclear localization of an ABI5-like bZIPs transcription factor was validated,and the promoter activity of several putative DNase I hypersensitive sites(DHSs)was assessed.The results indicated this system can be conveniently applied to protein subcellular localization and promoter activity assays.A highly efficient S.spontaneum mesophyll cell protoplast isolation and transient transformation method was developed,and it shall be suitable for in vivo functional gene analysis in sugarcane. | Qiongli Wang Guangrun Yu Zhiyong Chen Jinlei Han Yufang Hu Kai Wang | 2021 | The Crop Journal2021，9，1： | 1 |
| 3 | A new insight into the unique magneto-optical effect of layered perovskite(C_(6)H_(5)C_(2)H_(3)FNH_(3))_(2)MnCl_(4)显示文摘Magnet-optical materials embracing coupled magnetic and photoluminescent properties in single phase are promising in microelectronics and optoelectronic devices.However,the current research mainly focuses on traditional inorganic materials,and there are few reports on molecule materials.Recently,we synthesized an organic–inorganic hybrid complex((C_(6)H_(5)C_(2)H_(3)FNH_(3))_(2)MnCl_(4)(1)with perovskite structure.Physical measurements show that 1 not only behaves as an antiferromagnet with spin canting but also exhibits unusual fluorescent properties.Importantly,under the magnetic field at different temperatures,the luminous intensity of 1 changed,and a red-shift occurred with obviously optical hysteresis.These phenomena directly prove the existence of magneto-optical coupling in 1.More interestingly,the optical hysteresis can be observed in both low and high field,which is unprecedented in other molecular materials.Even in traditional inorganic materials,it can only be observed in strong field.This special function provides the possibility for the application of low energy consumption optoelectronic devices. | Zhao-Bo Hu Long-He Li Yibo Han Jinlei Zhang Jianrong Li Zilu Chen ShuyiWu Yi Zhang Heng-Yun Ye You Song | 2023 | Aggregate2023，4，3： | 0 |
| 4 | Unidirectional acoustic metamaterials based on nonadiabatic holonomic quantum transformations显示文摘Nonadiabatic holonomic quantum transformations(NHQTs)have attracted wide attention and have been applied in many aspects of quantum computation,whereas related research is usually limited to the field of quantum physics.Here we bring NHQTs into constructing a unidirectional acoustic metamaterial(UDAM)for shaping classical beams.The UDAM is made up of an array of three-waveguide couplers,where the propagation of acoustic waves mimics the evolution of NHQTs.The excellent agreement among analytical predictions,numerical simulations,and experimental measurements confirms the great applicability of NHQTs in acoustic metamaterial engineering.The present work extends research on NHQTs from quantum physics to the field of classical waves for designing metamaterials with simple structures and may pave a new way to design UDAMs that would be of potential applications in acoustic isolation,communication,and stealth. | JinLei Wu Shuai Tang Yan Wang XiaoSai Wang JinXuan Han Cheng Lü Jie Song ShiLei Su Yan Xia YongYuan Jiang | 2022 | Science China(Physics,Mechanics & Astronomy)2022，65，2： | 0 |
| 5 | Characterization of meiotic chromosome behavior in the autopolyploid Saccharum spontaneum reveals preferential chromosome pairing without distinct DNA sequence variation显示文摘Autopolyploidy and allopolyploidy may represent an evolutionary advantage and are more common in plants than assumed. However, less attention has been paid to autopolyploidy than to allopolyploidy,and its evolutionary consequences are largely unclear, especially for plants with high ploidy levels. In this study, we developed oligonucleotide(oligo)-based chromosome painting probes to identify individual chromosomes in S. spontaneum. Using fluorescence in situ hybridization(FISH), we investigated chromosome behavior during pachytene, metaphase, anaphase, and telophase of meiosis I(MI) in autotetraploid,autooctoploid, and autodecaploid S. spontaneum clones. All autopolyploid clones showed stable diploidized chromosome behavior;so that homologous chromosomes formed almost exclusively bivalents during MI. Two copies of homologous chromosome 8 with similar sizes in the autotetraploid clone showed preferential pairing with each other with respect to the other copies. However, sequence variation analysis showed no apparent differences among homologs of chromosome 8 and all other chromosomes. We suggest that either the stable diploidized pairing or the preferential pairing between homologous copies of chromosome 8 in the studied autopolyploid sugarcane are accounted for by unknown mechanisms other than DNA sequence similarity. Our results reveal evolutionary consequences of stable meiotic behavior in autopolyploid plants. | Xin Zhang Zhuang Meng Jinlei Han Haris Khurshid Ayman Esh Robert Hasterok Kai Wang | 2023 | The Crop Journal2023，11，5： | 0 |
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